ggKbase home page

SCNpilot_expt_300_bf_scaffold_4948_5

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3564..4196)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RER2_PHEZH similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 187.0
  • Bit_score: 86
  • Evalue 4.80e-14
GntR family transcriptional regulator {ECO:0000313|EMBL:KHS45254.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 34.2
  • Coverage: 202.0
  • Bit_score: 99
  • Evalue 7.70e-18
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 187.0
  • Bit_score: 86
  • Evalue 1.40e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGATCGGTTCACGTGTTTCGATCGCGCATGTCGCCATCAGGACCTGGCTACGCGACGGCGGTGTCCGGCCCGGCGAGGCGATCAACGTCAAGGACACGGCCGACGCGTTGCGTTTGAGCGTAACGCCCATTCGCGAAGCGCTTGAACGGCTCGTCGGCGAGCGTCTGGTCATCCCGGCGCGTGACCGGTCTGGCTTCATAATGCCCCGTCACAGCCCCCGGGATCTTGCCGAAATGATTGATCTGCACGCGGTCCTTGTCGATGGCGCGGTCACCAGATCGCAAGGGAAAACGATTATGTCCCTGGCTATCGGGCCGGGCGACGAGCGCACGGCCACGGAAGCCTTTTTCGACGCGCTGTTCCTATCGGCAGGGGGTTCGATGCTCGCCGATGCCGGGTCTCGTCTTGCTCACCAGCTGGCGCCGTTCCGTTTAGTCGAGCCTTCCGTCTTGCGGAGCGACGCGAGCGAGCTGGCAGAACTTGCAAAGGCGGCATCCGGCCAGCGGCCCCGCGCGGCATTCAAGGCATATCATCGGCGGCGCGCGTCGCGGGCCGTCGAGATCGTCCAGGCGCGCGAAGACTTTCCACCGAATGGCGCTATGCTTGGTCGCCTGCATATGGCCCAGAAATAG
PROTEIN sequence
Length: 211
MIGSRVSIAHVAIRTWLRDGGVRPGEAINVKDTADALRLSVTPIREALERLVGERLVIPARDRSGFIMPRHSPRDLAEMIDLHAVLVDGAVTRSQGKTIMSLAIGPGDERTATEAFFDALFLSAGGSMLADAGSRLAHQLAPFRLVEPSVLRSDASELAELAKAASGQRPRAAFKAYHRRRASRAVEIVQAREDFPPNGAMLGRLHMAQK*