ggKbase home page

SCNpilot_expt_300_bf_scaffold_8220_3

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(1320..1826)

Top 3 Functional Annotations

Value Algorithm Source
putative ATP-dependent DNA helicase (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 154.0
  • Bit_score: 146
  • Evalue 5.20e-33
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 154.0
  • Bit_score: 146
  • Evalue 2.60e-32
Putative ATP-dependent DNA helicase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2N8_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 154.0
  • Bit_score: 146
  • Evalue 1.90e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGAAGTCACGCAAGGCCGATCCTTCGCCACCGGACTATCGCGGGTTCGCAACGGCGATGGTCCGCTTCTTCATCGGGTGCCGCGACCGGCACCAGCCACAGGCGAAAACCGCCTTGCGTCTCAAATTCGGTGCGGACGAAGTGCTCGTCACGCCTGACGAGATGCTCATCGCTCCCGATGGCGGGCTGGTACTCAGGCGGTGCCGAAGCGGCCACCACCGCAAGTCGGACGACGACGACATCGCGGCCGCCGCGCTGCTGCTCGCCGCAGCGGAGACATTGCCAAGCGCAACCGTCGAGATCGTCTATCTCGCGGACGAGCTCGTCAAGCCCGTGGAGATCACACCAAAGAAGCTCGACACCCGGCGCGGATGGATCGGCGAATGCCTTCAGGGCGCCAGCGACGGACTCTTCAGGAAAGAGGAATCGTCATTCACTTGCCCGGGCTGCCCGGCCCTTATCATCTGCGACGCCGTCCCGCCGGGCACGCTGAAAATAATTCCCTGA
PROTEIN sequence
Length: 169
MKSRKADPSPPDYRGFATAMVRFFIGCRDRHQPQAKTALRLKFGADEVLVTPDEMLIAPDGGLVLRRCRSGHHRKSDDDDIAAAALLLAAAETLPSATVEIVYLADELVKPVEITPKKLDTRRGWIGECLQGASDGLFRKEESSFTCPGCPALIICDAVPPGTLKIIP*