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SCNpilot_expt_300_bf_scaffold_1570_4

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: comp(1509..1847)

Top 3 Functional Annotations

Value Algorithm Source
HxlR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00035C6831 similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 105.0
  • Bit_score: 161
  • Evalue 6.30e-37
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:KFC68544.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia s similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 103.0
  • Bit_score: 181
  • Evalue 4.80e-43
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 102.0
  • Bit_score: 160
  • Evalue 4.00e-37

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGGAAAACCCCGATGCGTCTCCTCACCGTTCCGGCTGTCCGATCAATCTTGGGCTCGAGGTCTTCGGCGACAGATGGAGCCTGCTGATCGTCCGCGACATGATGTTCGCGGGAAAGCGGCATTTCCGCGAGTTCCTGGCCTCGGACGAGGCCATCTCGACCAACATTCTCGCCGACCGGCTGGCAAAGCTGGTCGAGGCCGGCGTGCTGACGCGCGCCGACGATCCCGCCCACAAGCTGAAGGCGATCTATTCGCTGACCGAGATGGGGATCGAACTGCTGCCGATCGTTGCCGAGATCAGCCGCTGGAGCCGCAAATACCAGCCGGTCGATCCTTAG
PROTEIN sequence
Length: 113
MENPDASPHRSGCPINLGLEVFGDRWSLLIVRDMMFAGKRHFREFLASDEAISTNILADRLAKLVEAGVLTRADDPAHKLKAIYSLTEMGIELLPIVAEISRWSRKYQPVDP*