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SCNpilot_expt_300_bf_scaffold_2087_6

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: comp(4828..5538)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane anti-sigma factor n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FSE7_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 257.0
  • Bit_score: 156
  • Evalue 4.30e-35
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EHK79897.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Si similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 257.0
  • Bit_score: 156
  • Evalue 6.00e-35
putative transmembrane anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 257.0
  • Bit_score: 155
  • Evalue 2.10e-35

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGACGCAGAGTTTCGACGACACCGAACTGATGGCCTTCGCCGACGGCGTGCTCGATGAGCCGCGGTTCTCCGAGGTTGCCGCGGCGATCGAGGCCGACCCGCGACTGGCGGAGCGGCTGGAACTGATCGTCGCCGGCGGCAAGGCAGCGGGCGCGGTTTTCGCTCCTCTGGCCGGGCTGCCCCTCCCCGGCGAACTCACCGCCCGGGTCAAGGCTGCGATCGCCGCGCACGAGGGCCGCGTCGTGCCGTTCCGCCGCCGCGCGGCCGCCTGGCTGCCGGTGGCCGCCGCCGCTGCCGTCGCCGCGATCGCTGTCGGGCCGATCGCCTATTTCGCCGGTGGTGGGCGCGAGGCGCCGCTGGTCGCCATCGGTGCGCCGCTGGCGCCGGCGCTCACCGCCGAGCTCGGCCGCCTGCCGTCTGGCGCCGAGACGCGGCTCGGCAGCGCTGTGCTGAGGACGATCGCCACCTTCACCGATGCCAGCGCCACGCTCTGCCGGGAATTCGAGGTCGACGGTCCGCTCACGACGGTCGCTGTCGCCTGCCGGAACGGCGCCGAATGGCGTGTCGCGATCGCCATCGACGCGCCACCGGCCAATGACGGCTACGCACCTGCCTCATCGCTCGCCGCGCTCGACGCGTTTCTGGGCAGCATCGATGCGGGCCCGCCGCTGCCGCCGGAGGCGGAGGCCGAAGCACTGGCCCGGCCCTGA
PROTEIN sequence
Length: 237
MTQSFDDTELMAFADGVLDEPRFSEVAAAIEADPRLAERLELIVAGGKAAGAVFAPLAGLPLPGELTARVKAAIAAHEGRVVPFRRRAAAWLPVAAAAAVAAIAVGPIAYFAGGGREAPLVAIGAPLAPALTAELGRLPSGAETRLGSAVLRTIATFTDASATLCREFEVDGPLTTVAVACRNGAEWRVAIAIDAPPANDGYAPASSLAALDAFLGSIDAGPPLPPEAEAEALARP*