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SCNpilot_expt_300_bf_scaffold_4796_1

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: 3..566

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFF9_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 183.0
  • Bit_score: 232
  • Evalue 2.90e-58
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 186.0
  • Bit_score: 293
  • Evalue 2.50e-76
competence lipoprotein ComL similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 183.0
  • Bit_score: 232
  • Evalue 8.00e-59

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
TACCGCATCGGCAAGTTCGACGAAGCGATTCTCGCCGCCGACCGCTACATGGCGCTCTATCCGGGATCGAAAGAACTGCCCTACGTGCTCTATCTCAAGGGCAATTCGTATTTCGGGCAGATCAAGGACATTACCCGCGACCAGCAGATCTCGAAGAATGCCATCGAGACCTACAGCATGATCATCGCCAACTATCCGACGAGCAAATACGCCAAGGATGCGCAGGAAAAGATGGTGGTCAGCGTCGACCAGATCGCCGGCAAGGAGATGTCGGTGGGTCGCTACTATCTGGGCAACGGCAACTATCCGGCCGCCATCAACCGCTTCCGCGTGGTGGCCGAGCAGTTCCAGACCTCGACCCACATCGAAGAGGCGCTGTACCGCCTGACCGAGGCGAACCTGGCGCTCGGCCTCATTTCCGAGGCGCAGACCGCCGCCGCCGTGCTCGGCCACAACTATCCGCAGAGCAGCTGGTACAAGCAGGCGTTCGACCTGCTCGCCAAGCAGGGGATCTCGCCGCAGGTGAACGCCGGCAGCAGCCTGGCGCAGCTGAAGAAGAGCTAG
PROTEIN sequence
Length: 188
YRIGKFDEAILAADRYMALYPGSKELPYVLYLKGNSYFGQIKDITRDQQISKNAIETYSMIIANYPTSKYAKDAQEKMVVSVDQIAGKEMSVGRYYLGNGNYPAAINRFRVVAEQFQTSTHIEEALYRLTEANLALGLISEAQTAAAVLGHNYPQSSWYKQAFDLLAKQGISPQVNAGSSLAQLKKS*