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SCNpilot_expt_300_bf_scaffold_5393_5

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: comp(4099..4752)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=gamma proteobacterium SCGC AAA001-B15 RepID=UPI0002485ACD similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 217.0
  • Bit_score: 167
  • Evalue 1.70e-38
Uncharacterized protein {ECO:0000313|EMBL:KFL27669.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 217.0
  • Bit_score: 287
  • Evalue 1.60e-74
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 209.0
  • Bit_score: 104
  • Evalue 3.80e-20

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGTCTGACGTCCGCAACGACAACGAAGGGTACCGCCGCTTCCGCAAGGCGATGAACGACGGCACGCTGGAAGCCGGCATGGTGGTGACCCAATCCGAGCTCTGCGACCTGCTCGGCCTGTCGCTGTCGCCGCTGCGCGAAACGCTGGTGCTGCTGGAGGAGTTCGGGCTGGTCGAGATCAAGCCGCGCGCCGGCATCAAGATCGTCTACCCGGAGGTGGCGTTCATCCGCGAGAACTACCAGTTCCGCATCATGATCGAGATCTTTTCGCTCAAGAGCTTCGGTGACACCGTCTCGGACGCCTGGCTGGCCGACATGCGGACGAACCACGAGAAGTGCCGCATCAGCCTCACCGACGGCAGCCCTTTCGAGACGGCGCATACCCCGTTCCTCGAACTCGATGGCCGGATGCACCGCGAGATCGTCGCCTCGCTCGGCAACCGCGCCATCCTCGATACACACGAGCGCCTGCAGGAAAATATCCGCATGGCGCAACGCGTCCACCGCCGCCCCGGCTTCCGCGGCTACCTGGTCGACACCGTCGACGAGCACATGCGGGTCATCGCAGCGCTGGAACAGCGCGACGTCGCCGGGGCGATTGCGGCGATGGAAGCCCACTTCCAGGGCTCGACGCACCGGACGTTTGCGGCGTGA
PROTEIN sequence
Length: 218
MSDVRNDNEGYRRFRKAMNDGTLEAGMVVTQSELCDLLGLSLSPLRETLVLLEEFGLVEIKPRAGIKIVYPEVAFIRENYQFRIMIEIFSLKSFGDTVSDAWLADMRTNHEKCRISLTDGSPFETAHTPFLELDGRMHREIVASLGNRAILDTHERLQENIRMAQRVHRRPGFRGYLVDTVDEHMRVIAALEQRDVAGAIAAMEAHFQGSTHRTFAA*