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SCNpilot_expt_300_bf_scaffold_4939_2

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: comp(339..1232)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC/XylS family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGN3_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 287.0
  • Bit_score: 283
  • Evalue 2.20e-73
Transcriptional regulator, AraC/XylS family protein {ECO:0000313|EMBL:EAR51902.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 287.0
  • Bit_score: 283
  • Evalue 3.10e-73
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 24.7
  • Coverage: 304.0
  • Bit_score: 86
  • Evalue 1.10e-14

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Taxonomy

Oceanicola granulosus → Oceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCTCGGATCGCAGATCCTCGATCTCAACACCTCGATCAGCGGCGCCGATATCGGCGTGCCCGAGATCAAGACGTTCGGCTTTGCTACCTTCCAGAAGGCCATGGCGACCACCGACAGCTGGACGTCGCATGGCGGGCCGGAACTGGTCTTCGTCATCGAAGGCGAGGCCTGCTGGGAGCTCGAGGACGAGGCGCTGGTGCCGGTCTCGGGCGGCCAGTTCGCGCTGTTTCCGGCAGGCAAGAAGCACCGCATCGTCAACGGCCTCTATCCGCCCAGCCACTCGTTCTGGATCGTCATGGCCAGCGCCGGCAACGTCGCCGATCCGGCGCTCCTGACCCGCGAGGGGTTCCGCGACTTCCAGAACTATCTCGGCCGCCGCGGGCTGACCCATGACATCGAGGCGCGCTGCATGGATGCCATCGGCGAGTTGCACCGCCTGGTCAGCGATCCGCGCATCTATACCGGCTCGAGCCTCCTCATCGCCGAAATGCGGGCCGCCCTCCATACCGTCCTGATCGAGGCCTGGAAGGCCCAGGACAAGAAGCTCGCCGACCGCGACAACAGCGCGCTGATCGACGATTTCCTCGAGGTGCTGCATTCCGACCCCGACGCCGAGCTCAATATCGGCGAGGTGGCGACCCGGCTCGGCTTCTCGCGCAGCTACCTGCACAACCGCTTCCGCAAGGAAGTCGGCATGTCGCCCAGCGATTACGCCCAGCGCCTCAGGATCAAGCGCTGCTGCACCCGGCTCGCCACCACCAGCGAGCCGGTGACCGATATCGCCGTCGAGTTCGGCTTCGGCAGCTCGCAGTACTTCTCGCGCGTGTTCAAGAAATATCTCGGCACCACACCAACCGAATACCGCCAGCAAATGGCGATCAGGGAGCACTGA
PROTEIN sequence
Length: 298
MLGSQILDLNTSISGADIGVPEIKTFGFATFQKAMATTDSWTSHGGPELVFVIEGEACWELEDEALVPVSGGQFALFPAGKKHRIVNGLYPPSHSFWIVMASAGNVADPALLTREGFRDFQNYLGRRGLTHDIEARCMDAIGELHRLVSDPRIYTGSSLLIAEMRAALHTVLIEAWKAQDKKLADRDNSALIDDFLEVLHSDPDAELNIGEVATRLGFSRSYLHNRFRKEVGMSPSDYAQRLRIKRCCTRLATTSEPVTDIAVEFGFGSSQYFSRVFKKYLGTTPTEYRQQMAIREH*