ggKbase home page

SCNpilot_expt_300_bf_scaffold_8298_6

Organism: SCNPILOT_EXPT_300_BF_Devosia_66_6_partial

partial RP 7 / 55 BSCG 5 / 51 ASCG 4 / 38
Location: comp(3188..3616)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein FixJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUQ5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 135.0
  • Bit_score: 200
  • Evalue 1.20e-48
Transcriptional regulatory protein FixJ {ECO:0000313|EMBL:EYR82140.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 135.0
  • Bit_score: 200
  • Evalue 1.70e-48
luxR; regulatory protein similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 138.0
  • Bit_score: 191
  • Evalue 1.20e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGCCCGCGGTCTCCGGCTTGCAACTGCTGGAGCGGCTGGGCGAGCGTGGGATCGACTGGCCCTTCATCGTCATCACCGGGCATGGCGATATCCACGCCTGCCGGCGGGCCTTCAAGGCGGGTGCCGTGGATTTCCTGACCAAGCCGATCGACGAGCAGGTGCTGGTCGAGGCCGTGCAGGCAGCGCTGGCCCGGCTCGACACGCAGCAGGAAGACGCCGAAGCGCGGCAGCTGCTGGCGATGCTGACCGACCGCGAGCGCGAGGTGCTGGAGATGGTGAGCCGTGGCTGGGCCACCAAGCAGATCGCCGAGGCGCTGGCGATTTCGCCCCGCACCATCGACACGCATCGCGCCCACATTGCCGAAAAGCTCGGTACCAGCTCGGTCGCCGAGTTCGTTCGCATCGTCGCGGCGGCCGCCGGTCGGTAG
PROTEIN sequence
Length: 143
MPAVSGLQLLERLGERGIDWPFIVITGHGDIHACRRAFKAGAVDFLTKPIDEQVLVEAVQAALARLDTQQEDAEARQLLAMLTDREREVLEMVSRGWATKQIAEALAISPRTIDTHRAHIAEKLGTSSVAEFVRIVAAAAGR*