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SCNpilot_expt_300_bf_scaffold_2383_3

Organism: SCNPILOT_EXPT_300_BF_Rhodospirillales_66_5_fragment

partial RP 25 / 55 BSCG 21 / 51 ASCG 2 / 38
Location: 3433..3615

Top 3 Functional Annotations

Value Algorithm Source
Virulence effector protein SrfC n=1 Tax=Thiocapsa marina 5811 RepID=F9UIR8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 54.0
  • Bit_score: 60
  • Evalue 6.30e-07
conserved virulence factor protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 59.0
  • Bit_score: 123
  • Evalue 1.10e-25

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGGCCGACGGCGTGCCCGTCCTGAGCGAGGATCCCGCCCCGATCTATGCCGACTACTGCAAGGATTGGATGCGCGCGTTCCTGCAGCTCGCCATGGACAATGTCGGCTACGAAGGCGGCCGCGAGATCACGCCGGAGCAGAACGACCGGCTGGGCGCCATCCTGCGCGCCATGCCGGCCTGA
PROTEIN sequence
Length: 61
MADGVPVLSEDPAPIYADYCKDWMRAFLQLAMDNVGYEGGREITPEQNDRLGAILRAMPA*