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SCNpilot_expt_300_bf_scaffold_9315_4

Organism: SCNPILOT_EXPT_300_BF_Rhodospirillales_66_5_fragment

partial RP 25 / 55 BSCG 21 / 51 ASCG 2 / 38
Location: 1571..1927

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AF56_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 117.0
  • Bit_score: 188
  • Evalue 3.00e-45
rplT; 50S ribosomal subunit protein L20 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 118.0
  • Bit_score: 228
  • Evalue 6.20e-57
rplT; 50S ribosomal subunit protein L20 similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 117.0
  • Bit_score: 188
  • Evalue 8.40e-46

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGGCACGCGTAAAGCGGGGCGTGGCTGCACACGCTCGTCACAAGAAGGTTCTGAAGCTCGCCAAGGGCTATCGCGGCCGCGCCAAGGCGGCGTTCCGCGTCGGCATCGAGAAGGTCGAGAAGGGCCTTCAGTACGCCTATCGCGATCGGCGCAACAAGAAGCGCGCCTTCCGCGGCCTTTGGATCCAGCGCATCAACGCCGCGGCACGCGAGCATGGCATGACCTACTCGCAGTTCATGAACGGCATCCTGAAGGCCGGGATCGAGGTCGACCGCAAGGTCATGGCCGATCTCGCGGCGCGGGAGCCGGCGGCGTTTAAGGCCCTGGTCGATCAGGCCCAGGCCGCCCTCAAGTAA
PROTEIN sequence
Length: 119
MARVKRGVAAHARHKKVLKLAKGYRGRAKAAFRVGIEKVEKGLQYAYRDRRNKKRAFRGLWIQRINAAAREHGMTYSQFMNGILKAGIEVDRKVMADLAAREPAAFKALVDQAQAALK*