ggKbase home page

SCNpilot_expt_300_bf_scaffold_136_8

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(5567..7252)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035D9F06 similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 599.0
  • Bit_score: 1005
  • Evalue 2.10e-290
  • rbh
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 590.0
  • Bit_score: 869
  • Evalue 5.10e-250
ABC transporter, transmembrane region {ECO:0000313|EMBL:CAI09960.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleu similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 590.0
  • Bit_score: 869
  • Evalue 2.50e-249

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aromatoleum aromaticum → Aromatoleum → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1686
ATGACCCCGGCTCCCCCCACCTCCGCGGCCAGCCCCCGCCCCTTGTCGGCGCTGGCGCTGTGCCTGGGTTCCGGAACCATCCTGCTGGTGCCGCTGGCGTTTCGCGATCTCATCGACTTCGGCTTCGGCCAACCGGCGCAACCGAGCGGCGGCCTCCTTGGCGCCTTGAGCCTGAACGGACATTTCGTCGTCCTGTTCGGCCTCGCGTGCATCTGGGCGCTCGCCGTGGCGGCGCGCTACTACACCGTGGCCTGGATCGGCGAGCGGGCGACGGCGGATCTACGCAGCGCCGTCTACGCGCGCGTGCTGGCGCAATCGCCACAATTCTTCGAGACCCTGCAGACCGGCGAAGTGCTGTCGCGGCTGACCGGCGACACGACGCTGGTACAGACCGTGGTCGGCAGTTCGATTTCGATGGGCCTGCGCAGCCTGTTCCAGTTCATCGGCGGCATGATCATGCTGGCCGTCACCAGCCTCTATCTGTTCTCTCTCAACCTCGGCCTGATGGCGCTGCTGACGCTGCCCATCCTCGCCATCGGCCGCAAGGTCAAGAAACTCTCGCGGGAATCGCAGGACAAGATCGCCGATGCCTCAGCGCTGGCAGGCGAGATTCTCAACGCCATGCCGACGGTGCAGGCCTATACCACCGCGATCCGGCGCACGCGCGTGCGCGCCGCGCTCACGGCGCTGATCATCACCGCCGTGATGGGGACGATCATCTTCGTCCTGTGGATCGGCGCCCGCCAGGTGCACGACGGCATCCTGACCGGAGGCCAGCTGGCCTCCTTCGTCCTCTACGCGGCCCTGGTGGCCGGCGGCGTCGGCACCCTGTCGGAAGTGTGGGGTGACGTGATGCGCGCCGCCGGGGCGACGGAACGGCTGCTCGACCTGCTGCACGCCGAATCGGCCATCCACGAGGCCCTCAGCCCGCAAGCGCCGGCTCAGCCGGCCCGGGCGGCGATCCGCTTCGATCACGTCAAGTTCCGCTACCCTGCCCGTCCGGACACCGACGCGCTCCACGACATCCGCCTCGACATCGCGCCGGGCGAAAGCGTCGCGCTGGTCGGTCCCTCCGGGGCCGGCAAGACCACGCTGTTCCAGCTGCTGCTGCGCTATTACGAGGTATCCGCAGGGGCGATCCAGCTCAACGGACAGGACATCCGCCAGCTGAGCCTGCACGACCTGCGCCAGGGCATCGCCATCGTGCCGCAGGACCCGGTCATCTTTTCGGCCAATGCGCTGGAGAACATCCGTTACGGCCGCGCCACCGCCAGCGACGAAGAGGTCCTCCGCGCGGCCCGGGCCGCCCTGGTGAACGAATTCATCGAACGCCTGCCCGACGGCTTCCAGACCTTCCTCGGTGAGCGCGGCACCCGCCTGTCCGGCGGCCAGCGCCAGCGCATCGCGATCGCCCGCGCCATCCTGAAAGGCGCGCCGCTGCTGCTGCTCGACGAAGCCACCAGCGCGCTCGACGCGGAATCGGAAGCCCTGGTGCAGCAAGGCCTCGGCGCCGCCATGCAGGGGCGCACCACGCTGGTCATCGCGCACCGGTTGGCCACGGTGCAGAAAGTCGACCGCATCGTGGTGATGGACGGCGGCCGCATCGTGGAAACCGGCACCCCGCAGGATCTGCGCAAGCAGGGCGGGCTCTACGCGCGGCTGGCCGCACTGCAACTCAACCAGTGA
PROTEIN sequence
Length: 562
MTPAPPTSAASPRPLSALALCLGSGTILLVPLAFRDLIDFGFGQPAQPSGGLLGALSLNGHFVVLFGLACIWALAVAARYYTVAWIGERATADLRSAVYARVLAQSPQFFETLQTGEVLSRLTGDTTLVQTVVGSSISMGLRSLFQFIGGMIMLAVTSLYLFSLNLGLMALLTLPILAIGRKVKKLSRESQDKIADASALAGEILNAMPTVQAYTTAIRRTRVRAALTALIITAVMGTIIFVLWIGARQVHDGILTGGQLASFVLYAALVAGGVGTLSEVWGDVMRAAGATERLLDLLHAESAIHEALSPQAPAQPARAAIRFDHVKFRYPARPDTDALHDIRLDIAPGESVALVGPSGAGKTTLFQLLLRYYEVSAGAIQLNGQDIRQLSLHDLRQGIAIVPQDPVIFSANALENIRYGRATASDEEVLRAARAALVNEFIERLPDGFQTFLGERGTRLSGGQRQRIAIARAILKGAPLLLLDEATSALDAESEALVQQGLGAAMQGRTTLVIAHRLATVQKVDRIVVMDGGRIVETGTPQDLRKQGGLYARLAALQLNQ*