ggKbase home page

SCNpilot_expt_300_bf_scaffold_136_19

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(14046..16217)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 705.0
  • Bit_score: 1249
  • Evalue 0.0
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein id=1355379 bin=GWE1_T_denit_62_9 species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 705.0
  • Bit_score: 1249
  • Evalue 0.0
  • rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor domains protein similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 684.0
  • Bit_score: 779
  • Evalue 6.80e-223

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2172
ATGAATAGGTTCGAAAACCTGCAGCCCATCGAGCCGGACATGACGGACCCGGCGGCGCCGCTCGACGTCACGCGTCTGCTCACCACCATCACCGACAATCTGGTCGGGATGATCTACCGCTGCCGCATCGATGCCATCTGGACGATGGAATACGTCAGCGAAGGCTGCCACAAGCTCACCGGTTATCGCCCCGACGAACTGGTATTCAACAACCGCGTGTCCTATGACCAGATGACCCTGCCCGAGGATCGCGAGCACGTCAGCCGCACGATCCGCGCCGCCCTCGCGGCCAACGAGGCCTTCGATGTGGAATACCGCATCCGCCGTGCCGACGGAAAGGTGCGCTGGGTTCTGGAGCGCGGTGTCGGGCTGGTCGACCCGCACGGCCACCTGGCCTGGATCGAGGGATTCATCCAGGACATCTCCGAGCGCATGGCCGCCAACGAGGCGCTGCACGAAGCGGTGCGGCGCTATCGCAGCATTTTCGAGCACGCCACTGAGGGGATCTTCCAGACCACGCCGGAAGGCCGCTACCTCAATGCCAACCCGGCGCTTGCGCACATCTACGGTCACGCCTCGCCGGACGAACTGGTTGCACATCTGCACGACATCCAGCGTCAGCTCTATGTGCTGCCGGAACGGCGCGCCGAATTCGTGCGGTTGATGCAGGCGCATGGCGTGGTGCGCAATTTCGAATCGCAGGTCTACCGACGCGACGGCCACATCATCTGGATTTCCGAGAATGCGCGCGCGGTGCGCGATGCCGACGGCAGCGTGCAGTTCTTCGAAGGTACCGTGGTCGACATCACCGAGCGCAAGCAGCACGAAGCCGTGCTCGAGCACCAGGCCAGCCACGACAGCCTGACCGGCCTGCCCAACCGCTCGCTGCTGCGCGACCGCATCGAACAGGCCATCGTCAAGGCGCAGCGCGACCATCATCTGGTGGCAGTGGTGTTCGTCGATCTCGATCACTTCAAGCTGATCAACGACAGCCTCGGCCACCATGTCGGCGACCGCCTGCTGCTGGAAGTCGCCGACCGGCTCATGGCCTGCGTCCGCGGCCACGACAGCGTGGCGCGCCAGGGCGGCGACGAGTTCGTCCTGGTTCTCACCGAGCTGCACGAGGACAATGAAATCCTTGCCATCGTCAGCCGCCTGCTGGAAATCATTTCGCAGCCCTGGATGGACGAAGGGCAGGAATACGGGCTCAGCTGCAGCGTCGGCATCAGCTGCTACCCGCAGGACGGCGGCGATCCGGACGCCCTCCTGCGCTGCGCCGATGCCGCCATGTACAAGGCCAAGGCATCCGGCCGCAGCACCTATCACTTCTATACGCCCGAACTGAACCAGGCGATCAGCGAACGCCTCGAACTGGAAAACAGCCTGCGTCACGCACTGGAGCGCGAGGAATTCCGCGTCTACTACCAGCCCCGCATCGACGTCGCCAGCGGCCGCATCATCGGCGCCGAAGCCCTGATCCGCTGGGACTGCCCGGGCAAGGGCATCATCCCGCCCGACAGCTTCATCTCGATCGCCGAGGAAACCGGACTGATCATTCCGATCGGACAATGGATCCTGGAGGAGGCCTGCCGCCAGAACAGCGCCTGGCAGCGCGCCGGGCTGCCGCCCATCAACGTGTCGGTGAACCTGTCGCCCATCCAGTTCCGCCATACCGGGCTGGTGCAGTCGGTGGCCTCCGCCCTGGCGCAGGCGGGGCTCGACCCGGCCTTCCTGGAACTGGAACTGACCGAGTCCTTCGTCATGCACGATGCCGAGCGCATCAATGTCGCCATGAAGTCGCTGAAGACGCTGGGCGTCGACATTGCGGTGGACGATTTCGGCACCGGCTATTCCAGCCTCAGCTATCTCAAGCGTTTTCCCGTCGACCGCCTCAAGGTCGACAAAAGCTTCGTGCGCGACATCGACAGCGACCCCGACGATGCCGCCATCGTGCGGGCCATCATCACGCTCGGCCATGCGCTCGGGCTCAAGGTGGTGGCCGAGGGCGTCGAAACCCTTGCGCACCTCGAATTCCTGCGCCAGCACGGTTGCGACGAACTGCAAGGCTATTACTTCAGCCGCCCGATCCCCGCGCTCGAAATGGAGGCCTTGCTGTGCGCCGGCGACGCCAGCCAAACCGACATGAACCACCCGGATGACCATGAACCGTAA
PROTEIN sequence
Length: 724
MNRFENLQPIEPDMTDPAAPLDVTRLLTTITDNLVGMIYRCRIDAIWTMEYVSEGCHKLTGYRPDELVFNNRVSYDQMTLPEDREHVSRTIRAALAANEAFDVEYRIRRADGKVRWVLERGVGLVDPHGHLAWIEGFIQDISERMAANEALHEAVRRYRSIFEHATEGIFQTTPEGRYLNANPALAHIYGHASPDELVAHLHDIQRQLYVLPERRAEFVRLMQAHGVVRNFESQVYRRDGHIIWISENARAVRDADGSVQFFEGTVVDITERKQHEAVLEHQASHDSLTGLPNRSLLRDRIEQAIVKAQRDHHLVAVVFVDLDHFKLINDSLGHHVGDRLLLEVADRLMACVRGHDSVARQGGDEFVLVLTELHEDNEILAIVSRLLEIISQPWMDEGQEYGLSCSVGISCYPQDGGDPDALLRCADAAMYKAKASGRSTYHFYTPELNQAISERLELENSLRHALEREEFRVYYQPRIDVASGRIIGAEALIRWDCPGKGIIPPDSFISIAEETGLIIPIGQWILEEACRQNSAWQRAGLPPINVSVNLSPIQFRHTGLVQSVASALAQAGLDPAFLELELTESFVMHDAERINVAMKSLKTLGVDIAVDDFGTGYSSLSYLKRFPVDRLKVDKSFVRDIDSDPDDAAIVRAIITLGHALGLKVVAEGVETLAHLEFLRQHGCDELQGYYFSRPIPALEMEALLCAGDASQTDMNHPDDHEP*