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SCNpilot_expt_300_bf_scaffold_210_110

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 112508..112687

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L32 id=1360988 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 127
  • Evalue 5.40e-27
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 59.0
  • Bit_score: 127
  • Evalue 7.50e-27
rpmF; 50S ribosomal protein L32 similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 59.0
  • Bit_score: 124
  • Evalue 1.30e-26

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
ATGGCAGTCCAGCAGAACAAAAAATCCCCGTCCAAGCGTGGCATGCACCGCTCGCACGATTTTCTGACCAACCCGCCGCTGGCCGTCGAGCCGACCACGGGTGAAGCGCACCTGCGCCACCATATCAGCCCCAACGGCTTTTATCGCGGTCGCAAAGTCGTCAAGGCCAAAGGCGAATAA
PROTEIN sequence
Length: 60
MAVQQNKKSPSKRGMHRSHDFLTNPPLAVEPTTGEAHLRHHISPNGFYRGRKVVKAKGE*