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SCNpilot_expt_300_bf_scaffold_526_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 836..1120

Top 3 Functional Annotations

Value Algorithm Source
integration host factor subunit beta; K05788 integration host factor subunit beta Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 94.0
  • Bit_score: 185
  • Evalue 3.70e-44
Integration host factor subunit beta id=1332579 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 95.0
  • Bit_score: 184
  • Evalue 5.90e-44
integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 94.0
  • Bit_score: 183
  • Evalue 2.80e-44

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGACCAAGTCCGAGCTGATTGCTCAACTGGCGGCGCGGCATTCGCAATTTTCGGTTGCGGATATCGAGATGGCGGTGAAAACGATCCTCGACGCGCTGGCGAAAAACCTGTCGCGCGGGGAACGTATCGAAATCCGCGGTTTCGGCAGCTTCAGTCTGAGCTTTCGTCCCGCCCGTCTCGGGCGCAACCCCAAGTCTGGCGAGCGCGTGCAGGTGCCGGCCAAGTATGTGCCGCACTTCAAGGCGGGCAAGGAGTTGCGCGACCGGGTGGATTTTCCGCTCTAG
PROTEIN sequence
Length: 95
MTKSELIAQLAARHSQFSVADIEMAVKTILDALAKNLSRGERIEIRGFGSFSLSFRPARLGRNPKSGERVQVPAKYVPHFKAGKELRDRVDFPL*