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SCNpilot_expt_300_bf_scaffold_941_14

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(16118..17317)

Top 3 Functional Annotations

Value Algorithm Source
trbI; Conjugative transfer protein TrbI; K03195 type IV secretion system protein VirB10 id=12498576 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 425.0
  • Bit_score: 698
  • Evalue 3.90e-198
trbI; Conjugative transfer protein TrbI; K03195 type IV secretion system protein VirB10 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 426.0
  • Bit_score: 681
  • Evalue 9.10e-193
conjugal transfer protein TrbI similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 429.0
  • Bit_score: 592
  • Evalue 1.10e-166

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAGCACGCCCGCGATGCCACAATCTCCACCGGCCTGGACGAGTAAGGTCGATCCGGATACCTTGAGTCTGCGCGCGCCGCCGCGTCCGGTCACGCGGCTCAACCGGCGCCTGCTGGCCGTGCTCGCGGGAACACTGGGCGCGATCATCCTGGGGGCCACGCTATGGTCCTTGCAACCGCACAAGCGCGAACGCAACCCAGCCACCGAGCTGTACAACGTGGATCGCGTCTCACGGGCCGATAGCCTCGACCAATTGCCCAAGGACTATACCAAAGTGGTGCCAATGGTTAAGCCTGAGGTGCCGGTGTTGGGTGAGCCGTTGCCCGGTGACCTGGGGCCGGCCATCGTGCATGCGCAGAACCACGGGAACACGGGCGCGTACACCCCCGCGCAACCCGGTCGCATCGCACAGCCGGGCGATGCCGAGGATGCGGCGCGTTCGTCGGTGTTCTTCCGCAGCAGTAGTGCAACAAAGGCGGCACCGGCAACCACCGTAGCCGCAATCCAGCCCGAGCAGGCATCGGGCAATCAAGCCTTCAATCCGATGGCTTCGATATTGGCACAACTAACCGATCCGATGGCTGCGCAGAATCGGCAGGAGCAGAAGCAGGCGTTTGTCGCCAATGGCGTCGATACGACCACCCGCAATCCTGCCCGCCTGCAACTACCAGCCTCGCCCTACCAAGTGATGGCGGGCACCATCATTCCGGCGGCGCTGGTGACGGGCATCAACTCCGACCTGCCGGGGCAGGTCATCGCCAATGTCACCGAGGCGGTCTACGACACGGCCACCGGTCGCTTTCTGCTGATTCCGCAGGGCTCGCGGCTGATCGGCCGCTACGACAGTCAGGTTTCATTCGGTCAGCGACGGGTACTGCTGGTGTGGACGCGCTTGATCCTGCCTGATACTTCGTCGATTTCGCTCGACCGATTGCCTGGCATCGACCCGGCAGGCTATGCCGGGCTGGAGGATGGCGTCGATTGGCATTGGGATCGCATCCTTGCCGGTGCGGCGTTGTCCACGCTGCTCGGCGTCGGTGCGGAGCTGGCAGCACCCAACAACAACGGCGGCACCGGTAGCGTCACCGTCGCCGTTCGCACCATCCGGCCCGGTTTCCCGGTGCGGGTCATGGTGAACAAGGATCTGATCCTGCGGCCGTACCAGCCGCTGTTCTTCCAGAGGGGAGCGTCGCAATGA
PROTEIN sequence
Length: 400
MSTPAMPQSPPAWTSKVDPDTLSLRAPPRPVTRLNRRLLAVLAGTLGAIILGATLWSLQPHKRERNPATELYNVDRVSRADSLDQLPKDYTKVVPMVKPEVPVLGEPLPGDLGPAIVHAQNHGNTGAYTPAQPGRIAQPGDAEDAARSSVFFRSSSATKAAPATTVAAIQPEQASGNQAFNPMASILAQLTDPMAAQNRQEQKQAFVANGVDTTTRNPARLQLPASPYQVMAGTIIPAALVTGINSDLPGQVIANVTEAVYDTATGRFLLIPQGSRLIGRYDSQVSFGQRRVLLVWTRLILPDTSSISLDRLPGIDPAGYAGLEDGVDWHWDRILAGAALSTLLGVGAELAAPNNNGGTGSVTVAVRTIRPGFPVRVMVNKDLILRPYQPLFFQRGASQ*