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SCNpilot_expt_300_bf_scaffold_941_16

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(18330..19037)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbF n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D7A3 similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 234.0
  • Bit_score: 452
  • Evalue 2.20e-124
  • rbh
conjugal transfer protein TrbF similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 234.0
  • Bit_score: 447
  • Evalue 2.60e-123
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AJP47671.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1 similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 234.0
  • Bit_score: 447
  • Evalue 1.30e-122

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Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGCGATTCAAACGACCGCAGGTGCGCTACTCGGACACGCCCGAGCCCGTCACCCCCTATCAGGCCGCCGCGCAGGTCTGGGACCAGCGCATCGGCAGCGCGCGCGTGCAGGCGAAGAACTGGCGGCTGATGGCCTTCGGCTGCCTGTCGCTTGCCTTGCTGATGGCGGGTGGGCTGGTGTGGCGTTCGGCGCAGTCCATCGTCACCCCGTATGTGGTCGAAGTGGCCACCGGCGGTCAGGTGCGTGCAGTGGGTGAAGCGGCCACACCGTACAAGCCGAATGATGCACAGATCGCCTACCACCTGGCGCGCTTCCTTACCGACGTGCGCTCGCTGTCGATCGATCCGATCGTGGTGCGGCAGAACTGGCTCGAAGCCTACAACTACACCACGGATACAGGCGCGGCCACGCTGAACGACTACGCGCGCAGCAACGATCCGTTCGCGCGCGTAGGACAGGCCTCGACAGCAGTGGAGATCACCAGCGTGGTGCGCGCCAGCCAGTCGTCGTTCCAGGTGCGTTGGATCGAGCGCACCTATGTGAATGGTTCGCTCTCGGGCACCGAGCGCTGGACGGCTATGCTGTCCATCGTGCTGCAACCGCCGCGCACCGAAGAGCGACTGCGCAAGAACCCGCTGGGCATTTATGTCAACGGCCTGTCCTGGAGCCGTGAATTCGACACAACCGAAGGAACCCCGAAATCATGA
PROTEIN sequence
Length: 236
MRFKRPQVRYSDTPEPVTPYQAAAQVWDQRIGSARVQAKNWRLMAFGCLSLALLMAGGLVWRSAQSIVTPYVVEVATGGQVRAVGEAATPYKPNDAQIAYHLARFLTDVRSLSIDPIVVRQNWLEAYNYTTDTGAATLNDYARSNDPFARVGQASTAVEITSVVRASQSSFQVRWIERTYVNGSLSGTERWTAMLSIVLQPPRTEERLRKNPLGIYVNGLSWSREFDTTEGTPKS*