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SCNpilot_expt_300_bf_scaffold_941_23

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(23680..23994)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbD n=1 Tax=Thiobacillus denitrificans RepID=UPI00036ED53C similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 94.0
  • Bit_score: 165
  • Evalue 2.40e-38
Conjugal transfer protein TrbD {ECO:0000313|EMBL:AKC78173.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas ca similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 92.0
  • Bit_score: 165
  • Evalue 4.40e-38
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 91.0
  • Bit_score: 163
  • Evalue 2.60e-38

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Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGAACGCGGCTGGCCTGAACACAGCTGGCCTGAATACATCAGGCGCCGACACACCCAGCTTCGCGAATGGCTTCGAGATTCCGCTGCACCGCTCGCTGACCGAACCCATTCTGCTGGGTGGCGCACCGCGCACCGTGGCGATTGCCAACGGCACGCTGGCAGCCGCCGTGGGGCTCGGGCTGCAACTCTGGCTGCCTGGCATGTTGCTGTGGATGGTCGGGCACTCGCTTGCGGTGTGGGGCGCGCGAGTGGATGCGCAGTTCATGGCCGTGTTCGCTCGGCACATCAAGCACCGGCAGCTGCTGGACGTGTGA
PROTEIN sequence
Length: 105
MNAAGLNTAGLNTSGADTPSFANGFEIPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWLPGMLLWMVGHSLAVWGARVDAQFMAVFARHIKHRQLLDV*