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SCNpilot_expt_300_bf_scaffold_941_24

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_62_448

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(23991..24128)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AAP7_PSEF1 similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 45.0
  • Bit_score: 84
  • Evalue 2.40e-14
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 45.0
  • Bit_score: 87
  • Evalue 5.00e-15
conjugal transfer protein TrbC similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 45.0
  • Bit_score: 85
  • Evalue 3.80e-15

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 138
TTGACGCTGGCGTTCGGCGACACCAGCGGCGGCTTCCGCAAGCTGGTGCAGATCGTGTTCGGCCTGTCGATCGCGTTTGCTGCGTCGTCGTTCTTTCTGACCTTCTTCAGCTTCACGGGCGGAGCGGTGATCGCATGA
PROTEIN sequence
Length: 46
LTLAFGDTSGGFRKLVQIVFGLSIAFAASSFFLTFFSFTGGAVIA*