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SCNpilot_expt_300_bf_scaffold_539_9

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38
Location: comp(8977..9750)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomona similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 256.0
  • Bit_score: 395
  • Evalue 6.40e-107
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND80_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 256.0
  • Bit_score: 395
  • Evalue 4.60e-107
  • rbh
pseudouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 256.0
  • Bit_score: 395
  • Evalue 1.30e-107

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGTCCCGTCCTTCTTCCTTCCACCCGGCGCGCGCGACCGGGCCGACTCCGCCGTCGCGCTACGGGCTTGCCCGCGTGCTGTCCAAACTGGGTGTGTGCTCGCGCAGTCAGGCCGAGCAGTGGATTCGTGCGGGCCGGGTCAGTGTGGGCGGGCGGGTCGTCCGCGACCCCCAGCATCCGACCCTGATCGACCGCCAGGGGATCGCCATCGACGGCGAAGCCGTGGGCCGGGCCACGCCTGTCCACGTGGCCTTCAACAAGCCGCGCGGCATCGTGGTCAGCGCGGCCGACGAGCATGGTCGCGCGACGGTCTACACCGCGCTGGCGGCCGCCGGGCTGCCCTGGCTGGGTCCGGTCGGCCGGTTGGACAAGGCCAGCGAAGGACTGTTGCTGCTGAGCAACGACACCCGTTGGGCGGCTGCCATCACCGACCCGCTGACGCATCTGGAGAAGACTTATCACGTCCAGGTCGCGGGGCTGCCGGATGCTGCGGTGCTGGCCGCGATGCTGGCGGGCGTCGAGGATGCCGGTGAACGCCTGAAGGCGCGCCGCGTCACGCTGCTGCGTGCGGGCGCAAAGAATGCATGGCTCGAAGTGGTGTTGGACGAAGGCCGCAACCGACATATTCGTCGGCTGCTGGCGGCGCTGGGTTTTGACGTGATGCGGTTGATCCGGGTGGCGATCGGCCCGCTTGCGCTTGGCGAACTGGCGAAGGGCCAGTGGCGCCGGCTGGAAGAGCACGAGGTGCGTTCGCTGGCGGCGAAGCGGCCGTGA
PROTEIN sequence
Length: 258
MSRPSSFHPARATGPTPPSRYGLARVLSKLGVCSRSQAEQWIRAGRVSVGGRVVRDPQHPTLIDRQGIAIDGEAVGRATPVHVAFNKPRGIVVSAADEHGRATVYTALAAAGLPWLGPVGRLDKASEGLLLLSNDTRWAAAITDPLTHLEKTYHVQVAGLPDAAVLAAMLAGVEDAGERLKARRVTLLRAGAKNAWLEVVLDEGRNRHIRRLLAALGFDVMRLIRVAIGPLALGELAKGQWRRLEEHEVRSLAAKRP*