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SCNpilot_expt_300_bf_scaffold_539_16

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38
Location: comp(15963..16847)

Top 3 Functional Annotations

Value Algorithm Source
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 294.0
  • Bit_score: 562
  • Evalue 2.70e-157
methylisocitrate lyase (EC:4.1.3.30) similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 294.0
  • Bit_score: 540
  • Evalue 2.20e-151
2-methylisocitrate lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 294.0
  • Bit_score: 562
  • Evalue 1.90e-157
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGACAAAGTCAGCATCCCCGGGTGCCCGTTTTCGCGCAGCCGTCGCCGCCGAGCAGCCGCTGCAGGTCATGGGCGCGATCACCGCCTACGCCGGCCTGATGGCCAAACGCGTGGGCTACCAGGCGCTGTATCTGTCCGGCGGCGGCGTGGCCGCCAATTCGCTGGGCATGCCGGACCTGGGCATCTCGACGATGGAGGACGTGCTCACCGACGCGCGCCGCATCGTCGATGCCACCGGCCTGCCGCTGCTGGTCGACATCGATACGGGCTGGGGCGGGGCGTTCAACATTGCGCGCACGATCCGCTCGTTCGAGCGCGTCGGCGTGGCGGCGGTGCACATGGAGGACCAGGTCGGCCAGAAGCGTTGCGGTCACCGTCCGGGCAAGGAAGTGGTGTCGAAGGACGAGATGGTCGATCGGGTGAAGGCCGCGGTCGATGCACGTACCGATCCGGGCTTCGTGATCATGGCGCGCACCGACGCGGCGGCGGTAGAGGGCATCGATTCCGCGATCGAGCGCGCGGTGGCCTATGTCGAGGCCGGCGCCGACATGATCTTCCCCGAGGCGATGAAGACGCTGGCCGACTACCGCCAGTTCAAGGCGGCGGTGAAGGTGCCGATCCTGGCCAACCTCACCGAGTTCGGCTCCACCCCGTTCTTCACCACCGACGAACTGCGCGACGCCGGCGTCGACATCGCGCTCTACTGCTGCGGTGCGTACCGGGCGATGAACAAGGCGGCGCTGAACTTCTACGAGACCGTGCGCCGCGAAGGCACGCAGAAGAACATCATCGACACCCTGCAGACGCGCGAGGAGCTGTACGACTTCCTCGGCTACCACGCCTACGAGGACAAACTCGACGCGCTGTTCTCGCACAAGAGCTGA
PROTEIN sequence
Length: 295
MTKSASPGARFRAAVAAEQPLQVMGAITAYAGLMAKRVGYQALYLSGGGVAANSLGMPDLGISTMEDVLTDARRIVDATGLPLLVDIDTGWGGAFNIARTIRSFERVGVAAVHMEDQVGQKRCGHRPGKEVVSKDEMVDRVKAAVDARTDPGFVIMARTDAAAVEGIDSAIERAVAYVEAGADMIFPEAMKTLADYRQFKAAVKVPILANLTEFGSTPFFTTDELRDAGVDIALYCCGAYRAMNKAALNFYETVRREGTQKNIIDTLQTREELYDFLGYHAYEDKLDALFSHKS*