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SCNpilot_expt_300_bf_scaffold_839_17

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38
Location: comp(21930..22520)

Top 3 Functional Annotations

Value Algorithm Source
RDD domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSH3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 196.0
  • Bit_score: 331
  • Evalue 8.10e-88
RDD domain-containing protein {ECO:0000313|EMBL:EIM02415.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 196.0
  • Bit_score: 329
  • Evalue 3.30e-87
putative membrane protein/domain protein similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 196.0
  • Bit_score: 324
  • Evalue 2.80e-86

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGCTCGACCTGCTGTTGCGCGGTGTCTTCTTCTTGGTGGCGATGATCCCGCTGTCGATCTTCGGCGTGGCCGGCAACGGCCTGGCGATGCTGCTGCTGTTCGCGCTGATGTGGGCGTATGGGGTGGTCTGCGAGGTCTGGATGGACGGCCAGACGCCGGGCAAGCGCGCGCTCGGCCTGCGCGTGGTGCATGCCGACGGCACGCCGGTGACCTGGCTGCCGTCGGTGGTGCGCAACCTGCTGCGCGTGGTGGACATCCTGCCCGGCGTCTATGGCGTGGGCCTGGTCAGCACCCTGGTCGATCCGCACGCGCGCCGGCTCGGCGACATCGTGGCCGGCACCATGGTGGTGCATGCGCGCGAACTGCCGCCTGGCCAGCAGGTACCGGCGGTGTCCGCGCTGCCGCTGCCGCTGGCCTTGTCCGCCGACGAACAGGCCGCGCTGGTCGACTATGCCGAGCGCGCCGGCCAGCTCACCGTGCAGCGCCAGGAGGAACTGGCCAACCTGCTGACCCCGCTGACCGGCCTGCGCGACACCGCGGCAATCCGGCAACTGGTGGCGCACGTGAACTGGCTGCTGGGGCGCGCATGA
PROTEIN sequence
Length: 197
VLDLLLRGVFFLVAMIPLSIFGVAGNGLAMLLLFALMWAYGVVCEVWMDGQTPGKRALGLRVVHADGTPVTWLPSVVRNLLRVVDILPGVYGVGLVSTLVDPHARRLGDIVAGTMVVHARELPPGQQVPAVSALPLPLALSADEQAALVDYAERAGQLTVQRQEELANLLTPLTGLRDTAAIRQLVAHVNWLLGRA*