ggKbase home page

SCNpilot_expt_300_bf_scaffold_14969_1

Organism: SCNPILOT_EXPT_300_BF_Bacteroidetes_41_3

partial RP 12 / 55 BSCG 14 / 51 ASCG 4 / 38 MC: 1
Location: comp(1..324)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pontibacter roseus RepID=UPI00037CFB0F similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 109.0
  • Bit_score: 140
  • Evalue 1.10e-30
Transcriptional regulator {ECO:0000313|EMBL:EJF09318.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 109.0
  • Bit_score: 139
  • Evalue 3.50e-30
CopY family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 109.0
  • Bit_score: 132
  • Evalue 8.50e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pontibacter sp. BAB1700 → Pontibacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 324
ATGCAAAAACTATCGCTACAGGAAGAAGAATTAATGCGTGCCATCTGGAGTATAAAAGGAGGCTTTGTGAGGGACTTCATGGAACAGATGCAGGACCCGCCACCCTATACCACCGTGGCTTCTACCGTTAAGAACCTGGAGAAGAAAGCCTTTCTGCGCTCCAAAAAAATGGCCAATAGTTTATTCTATGAACCCATAGTAGAGGAAGCGGAATATACACGTACACACATGAAAGGTTTTGTGCAGGACTATTTCCAAAACTCTTACAAAGACCTGGTCACCTTTTTCGTCAAGGACAAAAAGATCTCTGAAAAAGACTTACAG
PROTEIN sequence
Length: 108
MQKLSLQEEELMRAIWSIKGGFVRDFMEQMQDPPPYTTVASTVKNLEKKAFLRSKKMANSLFYEPIVEEAEYTRTHMKGFVQDYFQNSYKDLVTFFVKDKKISEKDLQ