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SCNpilot_expt_300_bf_scaffold_1322_3

Organism: SCNPILOT_EXPT_300_BF_Devosia_62_6

near complete RP 45 / 55 MC: 3 BSCG 45 / 51 MC: 5 ASCG 11 / 38
Location: comp(1392..1676)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REZ0_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 94.0
  • Bit_score: 151
  • Evalue 5.50e-34
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 94.0
  • Bit_score: 172
  • Evalue 3.20e-40
50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 94.0
  • Bit_score: 151
  • Evalue 1.50e-34

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Taxonomy

Devosia insulae → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGCACGTCGCTGCGAACTGACCGGCAAGGGCGTTATGGTGGGCAACAATGTTTCCCACGCTCTCAACCGTACCCGTCGTCGTTTCCTCCCGAACCTCGTCAACGTCACCCTGCTGTCCGACGCGCTGAACCGTCCGGTCAAGCTGCGCATCTCCGCCGCTGCCCTGCGCTCGGTCGAGCATCGCGGTGGCCTCGATGCATTCCTGATCAAGCAGGACGACGCCGATCTGAGCCCCCTGGCTCTGGGCATCAAGAAGGAAGTGCGCGCCGCCCTCGCCGGCTGA
PROTEIN sequence
Length: 95
MARRCELTGKGVMVGNNVSHALNRTRRRFLPNLVNVTLLSDALNRPVKLRISAAALRSVEHRGGLDAFLIKQDDADLSPLALGIKKEVRAALAG*