ggKbase home page

SCNpilot_expt_300_bf_scaffold_2769_5

Organism: SCNPILOT_EXPT_300_BF_Devosia_62_6

near complete RP 45 / 55 MC: 3 BSCG 45 / 51 MC: 5 ASCG 11 / 38
Location: comp(4731..5060)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Spongiibacter tropicus RepID=UPI0003B70BCC similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 79.0
  • Bit_score: 69
  • Evalue 2.40e-09
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:EDZ41582.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 72.0
  • Bit_score: 65
  • Evalue 4.90e-08
LuxR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 72.0
  • Bit_score: 64
  • Evalue 2.90e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodobacteraceae bacterium HTCC2083 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGACCCACCATTTCGGCCGCGAGGCCATGAAGCCCGAATATATCCTGCCCGAGCTGCTGGAACGGCTGACGCCCCGGGAAAAGCAGGTGCTCGACATTATCCTCGAGGCCAAGACCGCCAAGGAAATCGCTTTCGATCTCGGCATTTCCCAGCGCACGGTCGAGGCCCATACCGAGCGTTTGCGCATAAAGTTGCTCGCGCGCTCGATCACCGATATCCTGCGCATTGTCGCGGCGGCCGAGCGCATGGGCCTGGTCCGCCACGATCAGTTTGTGACCCCGGTGCCGCATCGCGCTGGCCGCGTTGGTCTGCAGGTGGCGGCCAACTGA
PROTEIN sequence
Length: 110
MTHHFGREAMKPEYILPELLERLTPREKQVLDIILEAKTAKEIAFDLGISQRTVEAHTERLRIKLLARSITDILRIVAAAERMGLVRHDQFVTPVPHRAGRVGLQVAAN*