ggKbase home page

SCNpilot_expt_300_bf_scaffold_9132_2

Organism: SCNPILOT_EXPT_300_BF_Devosia_62_6

near complete RP 45 / 55 MC: 3 BSCG 45 / 51 MC: 5 ASCG 11 / 38
Location: comp(437..916)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7P5_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 145.0
  • Bit_score: 107
  • Evalue 1.50e-20
Uncharacterized protein {ECO:0000313|EMBL:KKB78841.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 149.0
  • Bit_score: 247
  • Evalue 1.30e-62
Crp family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 145.0
  • Bit_score: 107
  • Evalue 4.30e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
TTGCATCCGGGTCTGGGGCACATGAGAATGGATGACGCGGCCGGGGTCTTGTCCCAGGCCGATTTCTTCGACATCTGCGACGACGAGCAGCGGCGCATGCTGGGTTTTGCCGGCGACCGCCAGCATTTCGACGCCGATGACGTCATCTATCGCGCCGGCGACGTGCCGCAGGGCGCCTATGTGCTGATGGATGGCACGGTCAAGGCGCGCCATGAGGGGGCCGAGGCCGGCAAGCCCTATGCCCTCAGCGAACCGGGCAGCGTCATCTCGCCCACCGCGCTTATCCTAGACAAGCCGCGCCCGGTCACCTTTACGGCCGTGACAGATTGCGAATTGCTGTTCGTGCCGCGCAGCGCTTTTCTCAAGCTATTACGGCAATATCCTGAATTGGCGCAGCGGGCCGCCCAGCGCATCGAGCAGGATCTGGGCCGCTACATGCACGCCCTCGAGCCGCTCCGGCGCAAGATGAAGGGCGCCTGA
PROTEIN sequence
Length: 160
LHPGLGHMRMDDAAGVLSQADFFDICDDEQRRMLGFAGDRQHFDADDVIYRAGDVPQGAYVLMDGTVKARHEGAEAGKPYALSEPGSVISPTALILDKPRPVTFTAVTDCELLFVPRSAFLKLLRQYPELAQRAAQRIEQDLGRYMHALEPLRRKMKGA*