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SCNpilot_expt_300_bf_scaffold_24608_2

Organism: SCNPILOT_EXPT_300_BF_Devosia_62_6

near complete RP 45 / 55 MC: 3 BSCG 45 / 51 MC: 5 ASCG 11 / 38
Location: 660..1235

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DMV6_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 188.0
  • Bit_score: 197
  • Evalue 1.40e-47
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KFL30657.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavi similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 192.0
  • Bit_score: 322
  • Evalue 3.00e-85
dctD; C4-dicarboxylate transport transcriptional regulatory protein DctD similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 188.0
  • Bit_score: 197
  • Evalue 3.80e-48

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
TTGACTGAACCCAGCGTGCTCATCGTCGACGACGAGGAAATGATCCGCACCGCGCTCGAGCAATGGCTGCGGCTGTCCGGTTATGCGACCCATGTCGCGCCCGACGCCGCCGCGGCGCTGGCGCGGCTCGACGCCATCAGGCCCCATGTCATCCTGAGCGATGTGCGCATGCCCGGCCTCTCCGGGCTCGACCTCCTGCGCCGGGTGCGCGAGCTCATGGTCCCCGCCGAAGTCATTCTCATCACCGGCCATGGCGACGTGCCCATGGCGGTGGAAGCCATGCGCCAGGGGGCCTTCGACTTCCTGCAAAAGCCCTATGTGCCCGACGAGTTGGTGGCCAGCATCAAGCGGGCAGCCGAACAGGCCAGCCTCAAGCGCGAAATCGCCGATCTGCGCCGGCAACTCGATGGCGGCGATGCCGAACTCGCCCTGCGCCTCGTCGGTAGTTCCGAGGCCGTGGAGCGGCTGCGCCACATGGTGCGCGAACTCGCCCAGATCCCCGCCGATGTCATCATTCTGGGGGAAACCGGCACCGGCAAGGAAGTGGTGGCGCGGTGCCTCCACGATTTCTCCCCG
PROTEIN sequence
Length: 192
LTEPSVLIVDDEEMIRTALEQWLRLSGYATHVAPDAAAALARLDAIRPHVILSDVRMPGLSGLDLLRRVRELMVPAEVILITGHGDVPMAVEAMRQGAFDFLQKPYVPDELVASIKRAAEQASLKREIADLRRQLDGGDAELALRLVGSSEAVERLRHMVRELAQIPADVIILGETGTGKEVVARCLHDFSP