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SCNpilot_expt_300_bf_scaffold_29966_1

Organism: SCNPILOT_EXPT_300_BF_Rhizobiales_67_5

partial RP 11 / 55 MC: 1 BSCG 12 / 51 MC: 1 ASCG 3 / 38 MC: 1
Location: comp(3..539)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YYK1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 154.0
  • Bit_score: 168
  • Evalue 4.80e-39
Transcriptional regulator LysR {ECO:0000313|EMBL:GAN79580.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 154.0
  • Bit_score: 175
  • Evalue 9.50e-41
pcaQ; HTH-type transcriptional regulator pcaQ Pca operon transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 160.0
  • Bit_score: 156
  • Evalue 7.00e-36

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Taxonomy

Acidocella aminolytica → Acidocella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCTGTGGCAGCATTTGGCGCCGTTGATTAACGCTGGGGTTATATTGAGCATGGCAGGTCCGCGGCTGTATCCCCTGAACGGGCGCATCAAGCTGCGCCATCTGGTGGCGTTCCTCGAAGTCGCGCGCCTGAAGAGCGTGGTGAAGACAGCGGCGCTGCTCGGGCTGAGCCAGCCTGCAGTCTCCAAGACCGTGCAGGAACTCGAGGACATTCTCGGCGCGACGCTGTTCGAGCCGAATCGGCGCCCCATGGTCCTGACCGGGCCCGGAGAGATATTCTTCCGCTATGCCGGCGCGAGCCTGACGGCGCTCAAACAGGGTGTCAGCATGGTCGGGGACGAAGGCGCCGATGCGGACGTCGCCTTCTCGGTCGGGGCCCTGCCGACCGTTTCCGCCCATGTGCTTCCGCGGGCGCTGGCGGAGGTGACGAGACGCTACGGGGCGATGCGTCCGCGAGTCGTGACCGGCCCGAACGACGTGCTGATGTCCCAGCTCAGACTCGGGGATCTCGACTTGGTCATCGGCCGCATGCCCGAT
PROTEIN sequence
Length: 179
MLWQHLAPLINAGVILSMAGPRLYPLNGRIKLRHLVAFLEVARLKSVVKTAALLGLSQPAVSKTVQELEDILGATLFEPNRRPMVLTGPGEIFFRYAGASLTALKQGVSMVGDEGADADVAFSVGALPTVSAHVLPRALAEVTRRYGAMRPRVVTGPNDVLMSQLRLGDLDLVIGRMPD