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SCNpilot_expt_300_bf_scaffold_119_18

Organism: SCNPILOT_EXPT_300_BF_Sphingobacteriia_47_13

near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(20321..21190)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B74D70 similarity UNIREF
DB: UNIREF100
  • Identity: 32.2
  • Coverage: 295.0
  • Bit_score: 148
  • Evalue 1.40e-32
Two component sigma-54-specific transcriptional regulator {ECO:0000313|EMBL:CDF79029.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.6
  • Coverage: 297.0
  • Bit_score: 147
  • Evalue 3.40e-32
two-component response transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 295.0
  • Bit_score: 141
  • Evalue 2.90e-31

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Taxonomy

Formosa agariphila → Formosa → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 870
ATGGAAAAGTTTTCTATACAACAGACGTATGCCCTGCATGAATGCATACAAATCGCATCGCAAACGGATGTAAACGTATGGGTCACCGGTGAGCGAAACGGTGCCAGGGAACTGGTGGCGGAAGCGATTCATCATTTCAGTCCGCGTCGCCGGCATCCTTTTGTCGTTATCGAATGTAATCGCCTCGGCGAAAACAACCTGCACATCGAACTCACGCGGCCGGTAAACAGAAACATCAGTGGTTTGATCCATTCTCATCCGGAACTATTAGATAACCTGAAAGGCTGTACCGTTTTCCTTAAATACGGCGCCATGATATCGCAGGAAACACTCTCGAAGCTCGTCACCACACTCGTGGAGCGGACCAAAGCCAGGATTATCTTCGATGGTCCGGCAGAAGCTCCGGCAGCGGGTGATGCGGACAACAATTACCTGCTGATACGATTACCGATATTGAGCCATTGTGAAGAAGACATCTTATTCTTTGCACATCTCTTTTTGAAAAGGGCCAATCATGACTTCGATAAAAACATTACCGGTTTTTCGGAAGAGGTCATCCCCATGCTGCTGCAATATCCGTGGCCCGGACATTTGCCCGAACTGCGCCAGATGATCAGGCAGGCCGTGTTTCTTACTCCCGATGGAGAACAAATAGCAACACCGGTGATGCCGGATGAACTGAGGATCGGTCAGCATGCCAACCGCGCCAACGTGTTGAAAGAAGTGACCAACCAGGCCGAGTATGATCTGATCATGCAGACCCTGCAGCAGACACGCTATAATAAAAAGCAGGCAGCACAACTACTCAAAATCAGCAGGAAGACACTGTACAGCAAATTGAAAAAACTCTCGCTGCCATCGTCTACTTAA
PROTEIN sequence
Length: 290
MEKFSIQQTYALHECIQIASQTDVNVWVTGERNGARELVAEAIHHFSPRRRHPFVVIECNRLGENNLHIELTRPVNRNISGLIHSHPELLDNLKGCTVFLKYGAMISQETLSKLVTTLVERTKARIIFDGPAEAPAAGDADNNYLLIRLPILSHCEEDILFFAHLFLKRANHDFDKNITGFSEEVIPMLLQYPWPGHLPELRQMIRQAVFLTPDGEQIATPVMPDELRIGQHANRANVLKEVTNQAEYDLIMQTLQQTRYNKKQAAQLLKISRKTLYSKLKKLSLPSST*