ggKbase home page

SCNpilot_expt_300_bf_scaffold_116_28

Organism: SCNPILOT_EXPT_300_BF_Sphingobacteriia_47_13

near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(26166..27152)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTN2_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 328.0
  • Bit_score: 252
  • Evalue 8.00e-64
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 328.0
  • Bit_score: 252
  • Evalue 2.20e-64
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT92975.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 328.0
  • Bit_score: 252
  • Evalue 1.10e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 987
ATGCAACTCATTATCTCCAACCAACATAACGAAATCATTTCTTCCGGGCACACCGATAGCCCGCTGACGGCGTCTGTTTACAAGGAGTTCGCCTACCAGAGTTCCGAACCCTTCTGGCAGAGCACCGCCAGGGAAATACATTATCCGGGTACGCATATCGCCATGCACGAGGTGAACGTTCTTCAATCCGTCAACGTGCAAACCTTGGATGCGCCGCAGACGGTGAGTCTATTTTTTGTAGAAAATGGTTCGCTGGTTTCAAAAGCCGGTAAACAAACCCGCGACTGGCAGATTTCTTCGCTTCAACACAACCTGCTCTACAGCGCCTACTCTACCGATGCCACGTTTTTTGAGGAACAAAAAAATCTGCGCCTTAACATCATCAGCTTCACACCGAAAAGATTTGCAGAACTCACCGAAGGTGCCGGCAAAATAACAGACCATGTGAATAACCAGATCGCCAAAGGAAACAGTTCAAGCCTGAGCGAACAACGCAATCTCCGGATCAACCTGTCCATGATGCGACTGTTCCGCGACCTCAAAGACAGTTCCTTCCACCCTTCTGCCAGGAAATTACATGTGGAGTCCAAAGTATTGGAATTACTTGCCCTGCAGTGCAATCAACTCGCACAAGAGACCGACGAAACGAACAATTACAAGCTTACACCCCGGGACATACAAAAACTGAACGAGGTACGTGACTATCTCCTTAATGATATCGCTTATTCACCAGGTCTTTCCGAATTATCCCGGCATTCCGGTTTGAATATGTTCAAACTGAAATCAGGATTCAAACAATTGTTTAACCAGACCATTTTTGGTTTTCTGCGCGAACGCCGTTTGGAACATGCAATGGATCAGTTAAAAAACAGGGATAAAGCCTTAACAGATATTGCTTACGAATCAGGATTTGCCAGCCTCGCCCATTTCAGTGATGCCTTTCGCAAGAAATACGGTTCACCGCCCGGAAAATGGCGCAACCATTGA
PROTEIN sequence
Length: 329
MQLIISNQHNEIISSGHTDSPLTASVYKEFAYQSSEPFWQSTAREIHYPGTHIAMHEVNVLQSVNVQTLDAPQTVSLFFVENGSLVSKAGKQTRDWQISSLQHNLLYSAYSTDATFFEEQKNLRLNIISFTPKRFAELTEGAGKITDHVNNQIAKGNSSSLSEQRNLRINLSMMRLFRDLKDSSFHPSARKLHVESKVLELLALQCNQLAQETDETNNYKLTPRDIQKLNEVRDYLLNDIAYSPGLSELSRHSGLNMFKLKSGFKQLFNQTIFGFLRERRLEHAMDQLKNRDKALTDIAYESGFASLAHFSDAFRKKYGSPPGKWRNH*