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SCNpilot_expt_300_bf_scaffold_653_7

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(5182..6720)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Pseudomonas stutzeri RepID=UPI000313065A similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 512.0
  • Bit_score: 988
  • Evalue 2.40e-285
  • rbh
NodT family RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:GAO23860.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 512.0
  • Bit_score: 987
  • Evalue 9.90e-285
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 512.0
  • Bit_score: 983
  • Evalue 2.90e-284

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGAAATCCAAGCCCCGCACTCCCTTTCTTCGCGCAACCGTCACCGGCCTGACCCCTGGGCGCGCGCGTCCGCTCGCGCTGGCCCTGTCCTGCGTGCTGCTGACTGCCTGCGCAAGCGTGGGCCCCGACTACCGCGAGCCGCCGCCGGTCGACGTCGGCAGCGGCTGGAGCTTGCCGTTGGCAAGCGAATCTCAGTCCGCAGACTTGAGCCAATGGTGGTCTGCACTGGACGATCCCATCCTCGATCGCCTGATGGCCACGGCGCTGGCACAGAACCTGGATCTGCGCCAGGCTGCGGCACGCATCGATGAGGCACGCGCCCTGCGCGATCGTGTGGCCGGCGAGGCATTGCCCACCGCCGCCGCTGGCGCGAGCGTCAACCGGCGCCGTCAAAGCGAGAACGGACCCCTGCCCGTAGGTTCGATCCCCGGCCTTGACGCCACGCAGACCATCTACGACGCGGGCTTCGACGCGGCCTGGGAGGCCGACTTGTTCGGGGCCAAGCGGCGGGCGCTGGAAGGCGCCAGCGCCCGCCTGCAGGCGACCGAAGCCGAGGCGCAGGGCGTACGCATGCGCATCGTGGCCGAGGTCGCGCGCACCTGGTTCACCGCCGTCGGCGCCCGCTACGAGTTGCACGCACAACAGGCCACACTGGATACGCTGCAGCAGACCTTGGAATTGGTGCGCCTGCGGCATGCGCTGGGCGACGCGTCGGCCGCCGACGTGGAGGCGGCGTACGCCCAATGGACAGCAGTCAACGCGCTCATCCCGGATATCCAGGCGCGTCAGCGCGCCGCGATACTCAGCCTGGGCGTGCTGCTGGGCGCGCCGCCGGAGCGGGAGCTGGCACTACTGGATGGCCCCTTGACGCCGAGCACGCTGCGGGCGCTGCCGGTGGGCGAGCGCGCAGAGATGCTGCGCCGGCGCCCGGACGTGCTGGCTGCGGAACGTCGCCTGGCAGCGAGTTCCGCCGACATCGGCGTGGCCACGGCCGAGTTGTTCCCCAAACTCTCCATCGGTGTCGGCGGCGGGTTCCAAGCGCTCAGTACGGGCGATTGGTTCGATGCATCCAGCTCGCGTTTTTCCATCCTGCCGCTGATTTCCTGGCGCCTGTTCGACGGCGGCCGTGTGCGCGCCGAAATTCGGGCACGCGAGGCGGCCGAGCGGCAGGCCGCGCTGGCCTATGAGCAGGCGGTGCTGACGGCGCTGGGCGACGCCGAGCGCGCGCTGGGCGACTACCACGGCGGGCTAGACACGCTTGAGCGCCGCGGTATGGCACTGGATGCCGCGCGCACCAGCTACGGCCACGCCAAGGCGCGCTATGCGGCAGGCGACATTGCGCTGGTCGAACTGCTGGCCGCCCAGCGCAGCCTGCACGAAGCCGAAACCGCAGCCGCGCGCGCACATACCAACGCCGCCGTGCAACTGGTGGCGCTGTACAAGGCCCTTGGTGGCGGCTGGGACGTATCCACGACGGCATCGACCGCAACCCATCCGCTGCGGGGCGCTGCCGCCCCCGTCGCGTTTTCAAGCCGTTGA
PROTEIN sequence
Length: 513
MKSKPRTPFLRATVTGLTPGRARPLALALSCVLLTACASVGPDYREPPPVDVGSGWSLPLASESQSADLSQWWSALDDPILDRLMATALAQNLDLRQAAARIDEARALRDRVAGEALPTAAAGASVNRRRQSENGPLPVGSIPGLDATQTIYDAGFDAAWEADLFGAKRRALEGASARLQATEAEAQGVRMRIVAEVARTWFTAVGARYELHAQQATLDTLQQTLELVRLRHALGDASAADVEAAYAQWTAVNALIPDIQARQRAAILSLGVLLGAPPERELALLDGPLTPSTLRALPVGERAEMLRRRPDVLAAERRLAASSADIGVATAELFPKLSIGVGGGFQALSTGDWFDASSSRFSILPLISWRLFDGGRVRAEIRAREAAERQAALAYEQAVLTALGDAERALGDYHGGLDTLERRGMALDAARTSYGHAKARYAAGDIALVELLAAQRSLHEAETAAARAHTNAAVQLVALYKALGGGWDVSTTASTATHPLRGAAAPVAFSSR*