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SCNpilot_expt_300_bf_scaffold_159_23

Organism: SCNPILOT_EXPT_300_BF_Xanthomonadales_68_36

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(20684..22558)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 625.0
  • Bit_score: 1097
  • Evalue 0.0
phosphomethylpyrimidine synthase ThiC n=1 Tax=Dyella japonica RepID=UPI0002F34B7C similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 625.0
  • Bit_score: 1097
  • Evalue 0.0
thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 625.0
  • Bit_score: 1097
  • Evalue 0.0

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1875
ATGAATGCGCTGCCTTCCGACCTGGTGCGTCAGACCCAGGAACTCTCCGAACAGGTGACGCGGCCGATTCCCGGCTCGCGCAAGATCCACGTGACCGGCAGCCGCGGCGACCTGCGCGTGCCGCTGCGCGAAATCGCGCAGGCCGACACGCCGCTGGTGTTCGGTGCCGAGAAGAATGCGCCGGTGACGGTCTACGACACCTCCGGTCCGTACACCGATCCCGATTACCGCGTCGATCTCGGCGCCGGCCTGCCGCCGCTGCGTGCCGCCTGGATCGCCGAGCGCGGCGATGTCGAACAACTGGCCGGCCTGTCGTCCGAGTTCGGCCGCAAGCGCGAGGCCGACCGTCGTCTCGATGCCGTGCGCTTTCCGAACCTGCGCCGTCCGCTGCGTGCCAAGGCCGGCGCCAACGTGACGCAGATGCACTACGCGCGCCGTGGCATCGTCACGCCGGAAATGGAATACATCGCGCTGCGCGAGAATCAGCGCATCGAAGCGCTGGAAGCGCATCTGCGCGTGCAGCATCCGGGCGAGAGCTTCGGCGCCGCGCTGCCCCGGCTCATCACGCCGGAGTTCGTGCGCGACGAGGTTGCCCGCGGTCGCGCCATCATCCCGAGCAACATCAACCATCCCGAATCCGAGCCGATGATCATCGGCCGCAATTTCCTGACCAAGATCAACGCCAACATCGGCAATTCCGCGGTCACTTCGTCGATCGCCGAGGAAGTCGAGAAGATGGTCTGGTCGATACGCTGGGGCGGCGACACGGTCATGGACCTGTCCACCGGCAAGCACATCCACGAGACGCGCGAATGGATATTGCGCAACTCGCCGGTGCCGATCGGCACGGTGCCGATCTATCAGGCGCTGGAGAAAGTGGACGGCAAGGCCGAAGAGCTGACCTGGGAGATCTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGCGTGGACTATTTCACGATCCACGCCGGCGTGCGTCTTGCACACATCCCGCTGACCGCCAAGCGCGTCACCGGCATCGTCAGCCGCGGCGGATCGATACTCGCGAAGTGGTGCCTGGCCCATCATCGCGAGAATTTCCTCTACACGCATTTCGAGGAAATCTGCGAAATCATGAAGGCCTACGACGTGGCCTTCTCGCTCGGCGACGGCCTGCGTCCGGGCTCCATTGCCGACGCCAACGACGCGGCGCAGTTCGCCGAGCTCGACACCCTGGGCGAACTGACCCACATCGCCTGGAAGCACGACGTGCAGACCATGATCGAAGGTCCGGGCCACGTGCCCATGCAGCTGATCAAGGAAAACATGGAGCGCCAGCTGCGCGTCTGCAGCGAGGCGCCGTTCTACACCCTGGGACCGCTCACCACCGACATCGCGCCGGGCTACGACCACATCACGAGCGCGATCGGCGCGGCGATGATCGGCTGGTTCGGCACGGCCATGCTCTGCTACGTGACGCCGAAGGAGCATCTGGGTTTGCCGAACAAGCAGGACGTGCGCGACGGCATCATCGCCTACAAGATCGCCGCGCATGCGGCCGACCTGGCCAAGGGGCATCCGGGCGCGCAGGCGCGCGACAACGCGCTGTCCAAGGCGCGCTTCGAATTCCGCTGGCAGGATCAGTTCAACCTCGGCCTCGATCCGGAGAAGGCGCAGGAGTTCCACGACGAGACCCTGCCCAAGGACGCGCACAAGGTCGCCCACTTCTGCTCCATGTGCGGGCCGCATTTCTGCTCGATGAAGATCACCCAGGACGTGCGCGACTACGCCGCCGAGAAGGGCGTCAGCGAGAATCAGGCGCTGGAAGCCGGCCTGCAGCAGAAGGCGCAGGAATTCCGCGACGGCGGCGCGCAGCTGTATCGCGAGGCCTGA
PROTEIN sequence
Length: 625
MNALPSDLVRQTQELSEQVTRPIPGSRKIHVTGSRGDLRVPLREIAQADTPLVFGAEKNAPVTVYDTSGPYTDPDYRVDLGAGLPPLRAAWIAERGDVEQLAGLSSEFGRKREADRRLDAVRFPNLRRPLRAKAGANVTQMHYARRGIVTPEMEYIALRENQRIEALEAHLRVQHPGESFGAALPRLITPEFVRDEVARGRAIIPSNINHPESEPMIIGRNFLTKINANIGNSAVTSSIAEEVEKMVWSIRWGGDTVMDLSTGKHIHETREWILRNSPVPIGTVPIYQALEKVDGKAEELTWEIFRDTLIEQAEQGVDYFTIHAGVRLAHIPLTAKRVTGIVSRGGSILAKWCLAHHRENFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIADANDAAQFAELDTLGELTHIAWKHDVQTMIEGPGHVPMQLIKENMERQLRVCSEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNKQDVRDGIIAYKIAAHAADLAKGHPGAQARDNALSKARFEFRWQDQFNLGLDPEKAQEFHDETLPKDAHKVAHFCSMCGPHFCSMKITQDVRDYAAEKGVSENQALEAGLQQKAQEFRDGGAQLYREA*