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SCNpilot_expt_300_bf_scaffold_1020_3

Organism: SCNPILOT_EXPT_300_BF_Novosphingobium_63_58

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(1106..1915)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent helicase Lhr and Lhr-like helicase (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 259.0
  • Bit_score: 329
  • Evalue 7.00e-88
ATP-dependent helicase Lhr and Lhr-like helicase {ECO:0000313|EMBL:CCA92395.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCA92395.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingom similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 259.0
  • Bit_score: 329
  • Evalue 3.50e-87
ATP-dependent helicase Lhr and Lhr-like helicase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILU3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 259.0
  • Bit_score: 329
  • Evalue 2.50e-87

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Taxonomy

Novosphingobium sp. PP1Y → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGGGGCAGGCAGACCCCGCTCTGATTGAACAGGCTAACGATGGCCTGTTGCTGTTGGGGCCAACGGGGGAAACTTTGGTTTCCCATTACAGTTTCTACGCCGTGTTCCAGACACCGGAAGAATACCGGCTGATTTCGGATGGACGGGAGTTGGGCACTCTGCCGGTCGACAATATGGTCGCACCGGGCATGATGCTCATATTTTCCGGGCGGCGCTGGTTGGTCCAAGAGGTAGATGATCGTGCCAAGGTCATTCTTGTCACGCCCGCCAAGGCCGGCACCCCACCGATTTTTGGCGGGGATGCCGGCATCATCCATGACGTGGTGATTGAAAGGATGTTTTCCGTCCTAAAGCGGAATGACAGCCCCACCTATATGGACGCTACGGCCCAGGACCTATTGGCGGAAGCGCGCTCAAACTTCGCCCAGATGCAATTTCCCCAGGGTAGGATTGCACAAATCGGCGAAGGAGAGTGGCTCGTCGCTACTGGCCGTGGTACGGTCAAGACTACCACACTTGCCTTTGCGTTGAGGGCGAGGGGCTTTACCGTCCAAATCTATGATGGCTTTCTTGAGATTTTGGTCGCGAAAAGTACGCAGCCTCTGGAAGTTGCACTGAAAGACCTCGCAGACGGCGGGGACGCCAAGCTGTTTGCGGACAATGCCAATTTGATGACGGAAAAATTCCATCCTTATCTTTCAAAAGCGTTGCTCGAGATCGACGCATTGGCGGTTCGTCTCGATGAAAACTGTTTACCAGCGCTTGCAGAGGCTATCCTTTCTGATAGCCAACTGGTTCACGGGATTTGA
PROTEIN sequence
Length: 270
MGQADPALIEQANDGLLLLGPTGETLVSHYSFYAVFQTPEEYRLISDGRELGTLPVDNMVAPGMMLIFSGRRWLVQEVDDRAKVILVTPAKAGTPPIFGGDAGIIHDVVIERMFSVLKRNDSPTYMDATAQDLLAEARSNFAQMQFPQGRIAQIGEGEWLVATGRGTVKTTTLAFALRARGFTVQIYDGFLEILVAKSTQPLEVALKDLADGGDAKLFADNANLMTEKFHPYLSKALLEIDALAVRLDENCLPALAEAILSDSQLVHGI*