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SCNpilot_cont_300_bf_scaffold_2217_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_47

near complete RP 52 / 55 MC: 5 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(3..1322)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 component n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2K4_SPHJU similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 440.0
  • Bit_score: 860
  • Evalue 6.50e-247
virD4; type IV secretory pathway VirD4 component similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 440.0
  • Bit_score: 861
  • Evalue 1.10e-247
Type IV secretory pathway VirD4 component {ECO:0000313|EMBL:BAI96836.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 440.0
  • Bit_score: 861
  • Evalue 5.40e-247

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
GTGCTGGTCACGACCTGGGGCGCGACCGAATGGGTGGCCTGGCGGCTCGCCTTCCAGCCCGAACTCGGCGCGCCGTGGTTCCGCCTGTTCGGCTTTCCCTTCTATCTGCCGCCATCGTTTTTCTGGTGGTGGTACGGCTTCGACGCCTACGCCCCGGCCATCTTTGTCGAGGGCGCCTACATCGCGGCGGCGGGCGGCTTCATCTCGATTGCGGTTGCGATCGGCATGTCGGTCTGGCGGGCGCGCGAGGCCAAGAAGGTCGAGACCTATGGCTCGGCGCGATGGGCAGAGCGCCAGGAGGTGCAGGCCGCCGGCTTGCTTGGCGCCGATGGTGTCGTGCTTGGCCGATACGAGCGGGACTATCTCCGCCATGACGGGCCGGAGCATGTCCTCTGTTTTGCACCGACCCGTAGCGGCAAGGGTGTCGGCCTGGTGGTGCCGTCGCTGTTGACCTGGCCCGGCTCGGCCATCGTCCACGACATCAAGGGGGAGAACTGGCAACTCACCGCCGGCTTCCGCGCCAAGCATGGCCGCGTGCTGCTGTTCGATCCGACCAACGCCAAATCGTCAGCGTACAATCCGCTGCTCGAGGTGCGCCGCGGCGAATGGGAAGTCCGTGACGTCCAGAACATCGCCGACATCCTGGTCGATCCGGAAGGATCGCTGGAGAAGCGAAACCACTGGGAGAAAACCAGTCACGCCCTGCTGGTCGGTGCGATCCTCCACGTCCTCTATGCGGAGGCCGACAAAACGCTCGCCGGCGTCGCCGCCTTCCTCTCAGATCCGAAGCGGCCGATCGAGTCGACGCTCGACGCGATGATGAAGATGGCACATCTCGGTGAAGCCGGCCCGCATCCCGTCATCGCCAGCGCGGCGCGCGAGTTGCTCAACAAGAGCGACAACGAGCGATCGGGCGTGCTGAGCACCGCCATGTCGTTCCTCGGCCTCTACCGTGATCCCGTCGTCGCCGAGGTGACGCGGCGCTGCGACTGGCGCATCACCGACATCGTGGGCGGCACGCACCCGACCACCCTCTATCTCGTCGTGCCGCCCTCCGACATCAATCGCACCAAGCCGCTGATCCGCCTGATCCTCAATCAGGTCGGCCGCCGCCTGACGGAAGATCTGCAGGCGAAGGCCGGCCGCCATCGGCTGCTGCTGATGCTGGACGAGTTTCCGGCGCTTGGGCGGCTCGACTTCTTCGAGTCCGCGCTGGCCTTCATGGCGGGCTATGGCCTCAAGAGCTTCCTGATCGCCCAGAGTCTCAACCAGATCGAAAAAGCCTACGGCGCGAACAATTCGATCCTCGATAACTGCCAT
PROTEIN sequence
Length: 440
VLVTTWGATEWVAWRLAFQPELGAPWFRLFGFPFYLPPSFFWWWYGFDAYAPAIFVEGAYIAAAGGFISIAVAIGMSVWRAREAKKVETYGSARWAERQEVQAAGLLGADGVVLGRYERDYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSAIVHDIKGENWQLTAGFRAKHGRVLLFDPTNAKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNHWEKTSHALLVGAILHVLYAEADKTLAGVAAFLSDPKRPIESTLDAMMKMAHLGEAGPHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRITDIVGGTHPTTLYLVVPPSDINRTKPLIRLILNQVGRRLTEDLQAKAGRHRLLLMLDEFPALGRLDFFESALAFMAGYGLKSFLIAQSLNQIEKAYGANNSILDNCH