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SCNpilot_cont_300_bf_scaffold_41_8

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(10210..10731)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Niabella soli DSM 19437 RepID=H1NRU6_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 169.0
  • Bit_score: 132
  • Evalue 4.90e-28
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 169.0
  • Bit_score: 132
  • Evalue 1.40e-28
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 169.0
  • Bit_score: 132
  • Evalue 6.80e-28

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 522
ATGGATTTTATTCAAATAGGAAAAATTACCGGCACCCACGGACTCAGCGGCAATGTGACCGTATTTCATAAACTGGGCAAAACCCCGGGACTGAAAAACCTCAAACATATTTTCATCGAACTTAAGCGCGAAAGCTATATTCCTTTCTTTATCGAACAGATAAAAGTAGATAACGACCAGGAACTGTTCTTGAAACTTGAAGAAGTAGATGCAGTTGAAGAGGCCAAATCACTGAGCGGCAAGCAGGTATTCTTAAGCACAGAACAGTATGAAAAACTCAATCCCAAAGAGGCCGATATCAATTTTATAGGCTTTGAGGCCTGGGACGAGCAGGCCGGGAAACTGGGTAGAGTAGAGCATCTTTTTGAAACGCCCGGTCAATTGCTGGCCACCATTGCAGTAGGCGACAAAGAAGTGATCGCACCCCTCAACGAGCAGACAATCGTTTCCGTAGATATTCCTACCAAACAATTGAAGTTGAGATTACCGGAAGGGTTGCTGGATGTCTACCTCAACGAGTAG
PROTEIN sequence
Length: 174
MDFIQIGKITGTHGLSGNVTVFHKLGKTPGLKNLKHIFIELKRESYIPFFIEQIKVDNDQELFLKLEEVDAVEEAKSLSGKQVFLSTEQYEKLNPKEADINFIGFEAWDEQAGKLGRVEHLFETPGQLLATIAVGDKEVIAPLNEQTIVSVDIPTKQLKLRLPEGLLDVYLNE*