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SCNpilot_cont_300_bf_scaffold_1033_19

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(16182..16766)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K5J7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 186.0
  • Bit_score: 238
  • Evalue 5.40e-60
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KFF28812.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 194.0
  • Bit_score: 239
  • Evalue 3.40e-60
fecI; DNA-directed RNA polymerase sigma subunit FecI similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 194.0
  • Bit_score: 232
  • Evalue 1.40e-58

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Taxonomy

Chryseobacterium piperi → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGTATGCCGAAGCAAATATAGAAATGGCTCAAGAATCTCAATCCTCGCAGATCACGCAAACCGTAAAAAAATACGGTGCCCGGCTGATGTCTTTTATCTTACCTAAGGTGAAGAGTAAAGAAGATGCCGAAGATGTATTGCAGGATGTATGGTACCAGTTAAGTAATATCACCAGCATAGGCGATATACTCAACCTGAGTAGCTGGCTGTATAAAGTTTCGAGCAATAAGATCACAGACCTGTACCGCAAGAAAAGACCGGAAAGGCTGGAAGACTTCTTCTACGAAGATGAAGACGGGGAAATAAACTTCAGTTTTAAAGACCTGATGCTGCTGGACAACTCGGATAATCCTGAGCTTACATATTACCGGGAAGAGATCTGGAAGCAGTTTAACGAGGCTTTACTGGAAATGCCCGAGAAACAGAGCTATGTCTTTATTGAAAATGAATTGAAAGACCGCACGCTCCAGGAAATTGCAGATGAGCTGGGAGAAAACCTCAAAACGATCATCAGCAGGAAACAATACGCGACCAAACAGCTCAGGAAAAAACTGGCTACCCTATACGGGGAAATTAACGATTAA
PROTEIN sequence
Length: 195
MYAEANIEMAQESQSSQITQTVKKYGARLMSFILPKVKSKEDAEDVLQDVWYQLSNITSIGDILNLSSWLYKVSSNKITDLYRKKRPERLEDFFYEDEDGEINFSFKDLMLLDNSDNPELTYYREEIWKQFNEALLEMPEKQSYVFIENELKDRTLQEIADELGENLKTIISRKQYATKQLRKKLATLYGEIND*