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SCNpilot_cont_300_bf_scaffold_244_92

Organism: SCNPILOT_CONT_300_BF_TM7_49_69

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 1
Location: comp(98960..99532)

Top 3 Functional Annotations

Value Algorithm Source
Putative integral membrane protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RBR0_CLAMS similarity UNIREF
DB: UNIREF100
  • Identity: 26.9
  • Coverage: 175.0
  • Bit_score: 72
  • Evalue 5.00e-10
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 26.9
  • Coverage: 175.0
  • Bit_score: 72
  • Evalue 1.40e-10
Putative integral membrane protein {ECO:0000313|EMBL:CAQ00461.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subs similarity UNIPROT
DB: UniProtKB
  • Identity: 26.9
  • Coverage: 175.0
  • Bit_score: 72
  • Evalue 7.00e-10

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGGGCGGTTCTTTTTGTATAATAGAAAAAGACAAGGGAGAGATGATGAGTAAGACCAAATTAACTATTGGAATTATTGCGATTATTGGTGGGCTGGTTGTGGCTGGCCTTGGATTTTTGCCTCAAAACCAGGCGCGAGAAGATGCTGCGGTGTCATGGGCGCGACTTAGTAGCGGCGCAGGTAAGCAGGTGGAGGGTAAGGTTGCCGCGGTAGAAAGTAACGCGGTGACGGAGGGTACCCGACGGAGTCGGCACATCGAAACAGTGTATTGCCCGGTCTATCACTACACGGTGAACGACAAAGAATATGAAGTGCAGTCGGTTGGAGATAACTGCAAAGAAAATAAAGATGAGGTGAAAGTAGGTTCGACGGCGCCAATTGTGTATGACCCGTTGCAACCAGAAGAGGCTTTCGTAAAAACGGACGCGACGGCCGCATTCTACGGTGACACTGGTGGATCGCAGTGGGCGGGCATTGCAGTCGGTGCGGTACTTGTGCTGCTAGGGGTGGGCGCTATTTTCACTGCCCGCCAAAGCGCTACTTCTAAACAAAAAGTTGACGAAAGCAAATAA
PROTEIN sequence
Length: 191
MGGSFCIIEKDKGEMMSKTKLTIGIIAIIGGLVVAGLGFLPQNQAREDAAVSWARLSSGAGKQVEGKVAAVESNAVTEGTRRSRHIETVYCPVYHYTVNDKEYEVQSVGDNCKENKDEVKVGSTAPIVYDPLQPEEAFVKTDATAAFYGDTGGSQWAGIAVGAVLVLLGVGAIFTARQSATSKQKVDESK*