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SCNpilot_cont_300_bf_scaffold_1975_14

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_19

near complete RP 50 / 55 BSCG 49 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 13874..15100

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter CflA n=1 Tax=Variovorax paradoxus RepID=UPI0003682AB7 similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 396.0
  • Bit_score: 456
  • Evalue 2.60e-125
Variovorax paradoxus strain MEDvA23 contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32721.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 399.0
  • Bit_score: 456
  • Evalue 2.80e-125
ydgK; Bcr/CflA family multidrug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 389.0
  • Bit_score: 455
  • Evalue 2.20e-125

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGACGAAGACCACCGACATGTCTGTGCAGCGTGCGCCGCTGTGGCTGCTGGCGCTGATCACCTTCAGCGGCACGCTTGCCATGCATGTCTTCGTGCCGGCGCTGCCGCTGGCCGCGCGCGATCTCGAGGCCAGCGCCGGTTCGCTCCAGCTCACGATCAGCTTCTACATCCTCGGGCTTGCCTTCGGGCAGCTCTTCTACGGGCCGATCTCGGACCGCTTCGGCCGCCGTCCCGTCCTGATGGTCGGCTTGACCGTCTATACGCTGGCCAGCATCGCCGCGGCATTCACGCCCAGCGCCGAGGCGCTCGTCGCGACGCGGCTGCTGCAGGCGCTCGGCGGTTGCGCCGGGCTCGTGCTCGGCCGTGCCATCGTGCGCGATGGTTCAGGCATGGCCGATTCGACCCGCCGGCTCGCCACCATGAACCTGATCGTCGTCCTCGGGCCGGGCATCGCGCCGCTGATCGGCACCGCGGTATCGGAGACGCTTGGCTGGCGTGCGCTCTTCATCGGCCTTGCCGCGATGGGCGTCGCCAATCTGCTGCTCACCTGGCGCGTGCTGCCGGAGACGGCGCGGCCGGGCGCAGGCGTCGATTTCCGCTCGGTGCTCAGGGGCTATCGCCAGCTCATGCGCTCGCCCGCCTATCTCGGTTATGCGATCGGCGGCGGCCTCGCGACCACGCCGATGTACGCTTTCATCAGCGCGGCACCCTTCATCTTCACCACCGAGCTGGGCCGGCCGGCGCATGAGGTCGGTACCTACCTCGCCTTCGTCGTCGCCGGGATCTGGCTCGGCAATCTCGGTTCCAGCCGCCTCGTCGGCAGCGTCCGCGTCGGCTGGCTTCTGAGCGGTGGCAGCGCGATCAGCCTGCTGGGCGCGCTGGTGCTGACCGGGAGCGCCGTCTCCGGCCATCTCGGCGTTGCCTCGGTCCTGGCAGGTGCCTCGCTCTTCACCTTCGGGGCTGGCGTCGCCAGCGCGCCGGCCCTCGCCGAGGCGCTGAGCGTCGATCCCCGCCTCGCAGGGTCGGCCTCAGGCTTCTACGGCTTCATCCAGATGGCGATCGGCGCCTTCGCGACCTCGCTGGTGGGGCTGGGCGGGACGCCGGCGCTGTCCTCCGGCCTCGTGCTGACGGCTGCGGCTCTGGGAGCCCAGCTCTGCTTTGCATTGGCCCTGCGCGCGGCCCGCCTCGCCGCCGTCCAGCGTCTCGCGGCCGTCCCGGGAGAGTGA
PROTEIN sequence
Length: 409
MTKTTDMSVQRAPLWLLALITFSGTLAMHVFVPALPLAARDLEASAGSLQLTISFYILGLAFGQLFYGPISDRFGRRPVLMVGLTVYTLASIAAAFTPSAEALVATRLLQALGGCAGLVLGRAIVRDGSGMADSTRRLATMNLIVVLGPGIAPLIGTAVSETLGWRALFIGLAAMGVANLLLTWRVLPETARPGAGVDFRSVLRGYRQLMRSPAYLGYAIGGGLATTPMYAFISAAPFIFTTELGRPAHEVGTYLAFVVAGIWLGNLGSSRLVGSVRVGWLLSGGSAISLLGALVLTGSAVSGHLGVASVLAGASLFTFGAGVASAPALAEALSVDPRLAGSASGFYGFIQMAIGAFATSLVGLGGTPALSSGLVLTAAALGAQLCFALALRAARLAAVQRLAAVPGE*