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SCNpilot_cont_300_bf_scaffold_6424_7

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: comp(5851..6291)

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Pedobacter agri RepID=UPI00029A4D4E similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 145.0
  • Bit_score: 135
  • Evalue 3.70e-29
Contig33, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77516.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 148.0
  • Bit_score: 141
  • Evalue 7.20e-31
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 149.0
  • Bit_score: 120
  • Evalue 3.50e-25

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 441
GGCTTGTTAATTAATATTTCCTATAAACTGGGCCATTATTTTCAATGCCCGGCATTAAGTTATAATGCATTGTATGCTACAGGGTCCGGCAACCGGGAATACCAAAACCGCTGGCAGCACCCTGGCGATGAGCGCAAAACCAACGTACCCGCAATGGTCTATACTGATTATCCGAATTTTTCAGGCAGGGACGCTTTTTACACCGCTTCAGAAATTAATTATTTAAAAGCGGGTCATGTACGGCTTGAGTATATCAACCTCAGTTACTCCTTCCCATTTCATAAAAAAGAACATTTCTTTTTTAAGGAATTCTCTCTGGTCGGCAACCTCGCCAACTTGGGGATTATCTGGAGGAAAAACAAAGAGCATTTAGATCCCGACTATTATTACACGAATACGCCTCCCAGGCAGTTCAGTATGAGCCTCCGCGCCCGGTTTTAA
PROTEIN sequence
Length: 147
GLLINISYKLGHYFQCPALSYNALYATGSGNREYQNRWQHPGDERKTNVPAMVYTDYPNFSGRDAFYTASEINYLKAGHVRLEYINLSYSFPFHKKEHFFFKEFSLVGNLANLGIIWRKNKEHLDPDYYYTNTPPRQFSMSLRARF*