ggKbase home page

SCNpilot_cont_300_bf_scaffold_12334_2

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: 1086..1850

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GH32_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 254.0
  • Bit_score: 411
  • Evalue 4.70e-112
  • rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCH53207.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3 UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 254.0
  • Bit_score: 411
  • Evalue 6.50e-112
Helix-turn-helix, AraC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 251.0
  • Bit_score: 326
  • Evalue 9.50e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 765
ATGAAATTTGACAAACACTTTCCAACTGATAAATTAAAGGACTACATAAAATATTATGTAGTATCGGAAATGGACTTGGAAAGTGAATACAAAGTGTTTCCTTCATCGGGACTTGTTATGGGGTTTCAGTATAAGGGACAAATTTCGTCCATTAAAGACAAGGCTGTAAACAAGATGACATCGGCTGGAATTACCGGCATTTCTAACGGCTATAAAATCTTCAAAAATTCGGACAACATCGGAACCATTCTGGTATATTTTAGCGATATAGGTTTTGCGCATTTTTCTTCACATCCTGCAAATGAACTTTTTGATTTAGTTATTTCTCTTGATGACATTTTTGAAAAACAAAAAGTAAAGGAAGTTGAAGAAAAATTAGCCACAGTTTCCACGGACAAACAACGAATAAAAATAGTTGAGCAGTTTCTACTCTCTGAACTCAAAGACATTGAAACCGATAAATTAATAGTTGAAGCGGTAAAACTCATTTACCAATCGAAAGGAACAATCAAAATAAAAGAACTCAACGAAAAATTATTTATCAGTCAAAGCCCTTTTGAAAAACGGTTTAGAAAAACAGTAGGAACAACTGCCAAAAAGTTTGCTTCCATCGTTCGTTTTAACTCGGTTCTTGACAATATGAATGATGCGAAAACGCTGACCGAAATTTGCTACGAAAACAATTTCTTTGACCAAGCCCATTTCATCAAGGATTTTAAACAATTCACGGGCAATACCCCCGAAAATTTTAAACGCTTCTTGTAG
PROTEIN sequence
Length: 255
MKFDKHFPTDKLKDYIKYYVVSEMDLESEYKVFPSSGLVMGFQYKGQISSIKDKAVNKMTSAGITGISNGYKIFKNSDNIGTILVYFSDIGFAHFSSHPANELFDLVISLDDIFEKQKVKEVEEKLATVSTDKQRIKIVEQFLLSELKDIETDKLIVEAVKLIYQSKGTIKIKELNEKLFISQSPFEKRFRKTVGTTAKKFASIVRFNSVLDNMNDAKTLTEICYENNFFDQAHFIKDFKQFTGNTPENFKRFL*