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SCNpilot_cont_300_bf_scaffold_16294_2

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: comp(440..1225)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH53_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 251.0
  • Bit_score: 199
  • Evalue 3.70e-48
Fec operon regulator FecR {ECO:0000313|EMBL:KHJ38738.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glu UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 242.0
  • Bit_score: 223
  • Evalue 2.60e-55
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 251.0
  • Bit_score: 199
  • Evalue 1.10e-48

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 786
GTGAGCGTTTGGTGGCTGCTGCGCAGCAACAGTCCGGGTGTTCCGGAAAAGAAAGAAGATAAACATATTGTTTCCACACAAAAAGGGTTGCGTTCCATAGTAGATCTCCCGGATGGGACGCACGTATGGCTTAACGCAGGCAGCAGGTTGGAATATGGTGATGACTTTGGAAAAAAAGTGAGGGCGGTGCTGCTGAGTGGAGAAGCTTTTTTTGATGTAACGCACAATGCTAAGGTTCCCTTCGTCATTCATACCACATCAATGGATCTGAAAGTGCTCGGTACTGCTTTCAACGTACGCGCCTACCCTGAAGAAAAGTCGGCGGAGGCTTCACTTATCCGCGGAAGCCTGGAGGTTTCTTTCCCGGGAAGAACCGGTAGAAATATCATTCTTAAACCCAATGAGAAAGTATCTGTCGGTAGCCGGGGATACTATGTTTTGGGAGACCAGAAGCCATCTCCGGGAAATGACAGCATCAAGATTAAAGATAGTAAAATGCCGGTGGTAAGCAGTGTAACTTATCAACCGACAGACAGCTCTATTGTTGAGACTTCGTGGGTGTCCAACAGGCTTGTATTTCGAAACAAGCCATTTGAAGATGTGGCAGGAGATATGAGCAGATGGTATAACGTAGCCATTGAGTTTGAGAACAGTAGCCTGAAAGGTAAACGGTTTACAGGAACATTTGAGCGGGAAAATGTAGAACAGGCCCTTCAATGGTTGTCTTTTTCTTACAGGTTCTCTTACCGGTTCGATCCAAGCCGTAATGTGTATATTATTTATTAG
PROTEIN sequence
Length: 262
VSVWWLLRSNSPGVPEKKEDKHIVSTQKGLRSIVDLPDGTHVWLNAGSRLEYGDDFGKKVRAVLLSGEAFFDVTHNAKVPFVIHTTSMDLKVLGTAFNVRAYPEEKSAEASLIRGSLEVSFPGRTGRNIILKPNEKVSVGSRGYYVLGDQKPSPGNDSIKIKDSKMPVVSSVTYQPTDSSIVETSWVSNRLVFRNKPFEDVAGDMSRWYNVAIEFENSSLKGKRFTGTFERENVEQALQWLSFSYRFSYRFDPSRNVYIIY*