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SCNpilot_cont_300_bf_scaffold_16320_4

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: comp(1298..2107)

Top 3 Functional Annotations

Value Algorithm Source
Linocin-M18 n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HQI6_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 268.0
  • Bit_score: 399
  • Evalue 1.90e-108
Bacteriocin {ECO:0000313|EMBL:KJC40484.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 269.0
  • Bit_score: 407
  • Evalue 1.30e-110
Linocin_M18 bacteriocin protein similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 267.0
  • Bit_score: 391
  • Evalue 1.50e-106

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGAATAATCTTTACCGGGGGCTTGCCCCTATTTCTGACGCAGCCTGGGCCCAGATTGAAGAAGAAGCCGCCCGTACCCTTAAACGCCACATGGGGGCTCGCCGTATAGTGGATGTAACAGGCCCCAAGGGTCTTGGCCTTGCAGCCGTTGGTACAGGGCATACCAATAAAATACAATCCCCCGGTGAAGGGATCCAGGCAGTACAACGGGAAGTGAAGGCCTTGGTGGAGCTCCGAGCGCCGTTTGAGCTGTCGAGGCAGGCTATTGACGATGTGGAAAGAGGCTCTTCAGATTCGGACTGGGATCCGTTGAAAGATGCGGCAAAAAAAATCGCTTTTGCCGAAGACCACGCTGTATTTGAAGGTTATGAGGCGGCCGGCATTCGGGGTATACAGCAGGAGAGCAGCAATGAATCACTAACGCTTCCTTCCAATGTGCGGCATTATCCTGATGTTATTGCGCAGGCGGTAAGCCGGCTGCGGCTTGCCGGGGTCAACGGGCCTTATGTGCTGGTGCTGGGAGCAGATGCTTATACGCTCGCCACCGGCGGCAGCGACGAAGGGTACCCGGTGCTGCAGCATATTCACCGGCTTGTTGAGGAGGACATTATCTGGGCGCCGGCCATCAGCGGCGGTTATGTGCTTTCTGCCCGCGGCGGCGATTTTGAGCTGGATCTCGGCCAGGATGTTTCCATCGGCTATACCAGCCATTCCGAAACTTCCGTGCAGCTCTACCTGCAGGAGAGCTTTACTTTCCGGGTGCTGACTACTGAGGCTTCGGTAGTGCTTTCGGCGGCGGAAAAGAAATAA
PROTEIN sequence
Length: 270
MNNLYRGLAPISDAAWAQIEEEAARTLKRHMGARRIVDVTGPKGLGLAAVGTGHTNKIQSPGEGIQAVQREVKALVELRAPFELSRQAIDDVERGSSDSDWDPLKDAAKKIAFAEDHAVFEGYEAAGIRGIQQESSNESLTLPSNVRHYPDVIAQAVSRLRLAGVNGPYVLVLGADAYTLATGGSDEGYPVLQHIHRLVEEDIIWAPAISGGYVLSARGGDFELDLGQDVSIGYTSHSETSVQLYLQESFTFRVLTTEASVVLSAAEKK*