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SCNpilot_cont_300_bf_scaffold_14544_3

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: 1534..2118

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH54_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 168.0
  • Bit_score: 158
  • Evalue 7.10e-36
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO42771.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 177.0
  • Bit_score: 159
  • Evalue 4.50e-36
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 168.0
  • Bit_score: 158
  • Evalue 2.00e-36

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGAGAAAACAAATATCATCCATACAGGATTTATTAGTACATATTGGTAATGGTGATATAGCTGCGTATGAAGAATTGTATTACGCCTTTTATCCCCGCTTGTACAGCTTTGCGCTTTCCCTTATCAAGTCAAAACAGCAGGCAGAAGAAATAGTGTCGGATGTATTTATAAAAGTCTGGCAATCCCGGGAACGCCTCGCGGAAGTTGACAACATAAGCGTTTATCTCTATACCAGCGTTCGCAACAGGACTATAGATTATTTAAATAAAGACAGGAGATATAGTGTTGTGCGCTATTCGCAGGACGAATGGGAAGACGTATTGATTGAATTAAAAGACCCGTCTGATTATTGCATCTCGACCGAGCTGATGAAAAGGATAAACGCCGCCATCAATCAATTGCCCTCACAATGCAAGATCATCTTCAAATTAATTAAAGAAGATGGCCTGAGCTATAAGCAGGTGGCGGAAATAATGGAGCTGTCCCCGTTTACCGTAAGAAATCAGTTAGCCATTGCCGTTCGTAAAATGGGGGAAATACTACCCGAGTATATTCATGAAAGCCTGTTGGACAGCAAAAAATAA
PROTEIN sequence
Length: 195
MRKQISSIQDLLVHIGNGDIAAYEELYYAFYPRLYSFALSLIKSKQQAEEIVSDVFIKVWQSRERLAEVDNISVYLYTSVRNRTIDYLNKDRRYSVVRYSQDEWEDVLIELKDPSDYCISTELMKRINAAINQLPSQCKIIFKLIKEDGLSYKQVAEIMELSPFTVRNQLAIAVRKMGEILPEYIHESLLDSKK*