ggKbase home page

SCNpilot_cont_300_bf_scaffold_29381_1

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: 43..1731

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFM3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 564.0
  • Bit_score: 567
  • Evalue 1.90e-158
  • rbh
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 564.0
  • Bit_score: 567
  • Evalue 5.40e-159
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEV99462.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 564.0
  • Bit_score: 567
  • Evalue 2.70e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1689
ATGAAAAGCGGTTACAGGGCGTACCTGATCGTATGTATTCTTTCACTATGTATTTTCAATCTTAATGCCCAGGATACCCTGAAAGAGCGGGGCTCACGTTTCCGGTCGCGGGATTCTGTTATGAATAACAACGATACCGGGCGGTTTCACCGCGGAGACATGTTTCGCTCCCCGCAGGATGTTGCGGGGCGGAATAATAACGATACCGGGCGTTTCAGGCGTGGAGGAATGTCTTCCATTTTCTCAGACTCAACCCAGCTGACCACGAGTGATTACCAGGCTGAAATTGAAAAGTCATATATACTTCTTGATAAAATAGGTAACAATAGTAATCTTGGCCCTGCTGTAAAAAAGATAGCAAAGGATCTTAATGATAATGATTCAATTCTGGCCGTACTTAATGATAATATTACCAACAACAGCAAGGCCCTGAGCTTCAGAAATCTGGAAGTATATAAAACCTTACTGAATAATATTAATGATGAGATTGGATTTTATAATGTTGCGCTCGACAGTGCGGATGCGCGCCTTACTCTTTTAAAGAAAGATATGCGCACACTTATTGGCGATACCATTATCAGGCAAATGATGAAGGATTCTGCTTTGAGACAACAATTTTCAGCACAGCTCAATGACCTTAGAAGCAACTGGCGGCAAAATACCAGGGAGCTGAGAAGGAATGATGCATTACTTGAACAACTGCAAACGCAGGTATCTGCCAGTTCTGTTTTAACAATTCAATTGCTTGAAAAAGTAGAAACCCTGCTGGTATCATCAACGGTAAGACTATTTGGAAAAGAATATACCTATATATGGGAAAAAGCTTCCGACAGCTCATTACAGCAGCTTAAAGCTTCTTTTGAAAAAGCATATAAAGGCGAACGGAAAGCTACGCGTTATTATTTTAAAGATTCCGGACCCCGCCGGTTATTGTTATTGCTGATTGCTGTTGCTTTTTTTATATGGGTATTTCGCAATATCAGGGTTATCAAAAATCACCATGCGCTGAGTGCTGTAAGGGATATGGATTTTTCGTTTATTCTTACAGGTTATATTGTCTCCTCATTTGTGGTGATGTTTGTAATAGCGCCATTGTTTGACCTTCATGCGCCATCGGCTTACATAGAATCCATGCAGTTTCTGCTTATTATTGTGCTCACTGTTGTTTGCTGGAAAAAGTGGCCGCGCAGTTTGTTCTATTACTGGACAGGCATTGTGCTTCTTTTTATCGCGTTTTCATTCATGCATCATATTCTGGCGCCGGACTTTTTTCAACGAAGCTGGCTGATTATATTGAATGTACTCTCAATAGTGCTGGGCTCTTTGTTTTTAAGAAAAATGCAGCAATACCTTTACCTGAAAGGGTTTATTCGTTTTGTGATCATACTTCATAATTTTATGAACCTGCTTGCTATCTTATGCAATGTATTTGGCAGATTTTCATTGGCGCAGATACTCGGTAACGCGGCAATATATTCATTTACACAGGCAATAGGGCTTGCAGTATTCAGCAAGGTGTGTATTGAAGCAATATTGCTGCAGATTGCCGCAAGCCGTATTAAAAGAGATGCTGCCGTCCGGTTTGATTACCAGCATGTGCTGGATGGTTTCCGCAAGCCCATTTTATTTCTTGTGGTGGTATTATGGTTAATTGTATTTACAACTAATCTGAATATCTATAATTCATTA
PROTEIN sequence
Length: 563
MKSGYRAYLIVCILSLCIFNLNAQDTLKERGSRFRSRDSVMNNNDTGRFHRGDMFRSPQDVAGRNNNDTGRFRRGGMSSIFSDSTQLTTSDYQAEIEKSYILLDKIGNNSNLGPAVKKIAKDLNDNDSILAVLNDNITNNSKALSFRNLEVYKTLLNNINDEIGFYNVALDSADARLTLLKKDMRTLIGDTIIRQMMKDSALRQQFSAQLNDLRSNWRQNTRELRRNDALLEQLQTQVSASSVLTIQLLEKVETLLVSSTVRLFGKEYTYIWEKASDSSLQQLKASFEKAYKGERKATRYYFKDSGPRRLLLLLIAVAFFIWVFRNIRVIKNHHALSAVRDMDFSFILTGYIVSSFVVMFVIAPLFDLHAPSAYIESMQFLLIIVLTVVCWKKWPRSLFYYWTGIVLLFIAFSFMHHILAPDFFQRSWLIILNVLSIVLGSLFLRKMQQYLYLKGFIRFVIILHNFMNLLAILCNVFGRFSLAQILGNAAIYSFTQAIGLAVFSKVCIEAILLQIAASRIKRDAAVRFDYQHVLDGFRKPILFLVVVLWLIVFTTNLNIYNSL