ggKbase home page

SCNpilot_cont_300_bf_scaffold_26941_2

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: comp(755..1318)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-recycling factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL96_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 187.0
  • Bit_score: 274
  • Evalue 8.60e-71
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1349421 species="Bacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 187.0
  • Bit_score: 286
  • Evalue 2.30e-74
ribosome recycling factor similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 187.0
  • Bit_score: 274
  • Evalue 2.40e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGTCAGAAGATGTAAAGCTTGTAATGGATATTTCCGAAGATGGTATGCGCAAAGCTATCAGTCATTTGGAAACGGAACTGGTAAAGATAAGAGCCGGAAGGGCAACTCCGCAGATGTTTGATGGATTGGTGGTAGACTATTACGGTTCTTCCACACCTATCAGCCAGGTAGGAAATATTTCAGTTGCCGATGCCCGCACGATAACCATCCAGCCCTGGGAAAAAAACATGCTGCAGCCTATTGAACGTGCTATCATTGCTGCAAACCTGGGAGTAACACCCCAGAATGACGGGGCCATTATCCGGATATTTTTACCCGCGCTGACGGAAGAAAGAAGAAAAGACCTGGTAAAAAAAGTGAATGCTGAAGGCGAACAATCAAAGGTTTCTATAAGGAGTGTTCGCAGGGATACGATTGAAGAAATAAAAAAGCTGCAGAAGAACGGGTTAAGCGAAGATGAAGGGAAGGACGCTGAAAAAGAAGTACAGCAAATGACGGATAAATATATCGCGCTTATTGACAAGCATCTTGCAGCCAAGGAAAAAGAAATAATGGCGGTATAA
PROTEIN sequence
Length: 188
MSEDVKLVMDISEDGMRKAISHLETELVKIRAGRATPQMFDGLVVDYYGSSTPISQVGNISVADARTITIQPWEKNMLQPIERAIIAANLGVTPQNDGAIIRIFLPALTEERRKDLVKKVNAEGEQSKVSIRSVRRDTIEEIKKLQKNGLSEDEGKDAEKEVQQMTDKYIALIDKHLAAKEKEIMAV*