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SCNpilot_cont_300_bf_scaffold_52787_1

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: comp(3..671)

Top 3 Functional Annotations

Value Algorithm Source
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T919_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 223.0
  • Bit_score: 356
  • Evalue 1.60e-95
GH3 auxin-responsive promoter similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 223.0
  • Bit_score: 356
  • Evalue 4.40e-96
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEV96972.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 223.0
  • Bit_score: 356
  • Evalue 2.20e-95

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 669
ATGCATACGGCCCTGGAAGACCAGGAACGTATCCTTAAAGAACTCATCAAAACCGGCCGCAAGACTGCTTTTGGAAAGGAGCATGGTTTTAATAATATCAATACTTACGAGGAATTTAAAAAAGCAGTTCCCCTGCGCGACTATGAAGCCTTTAAGCCTTATATAGAACTGATCAAACAGGGAAAACACAATATATTATGGAAAGGCCTGCCCATTTATTTTGCCAAAACCTCGGGCACCACCAGCGGCACCAAATATATTCCGATCACTAAAGAATCTGTTGATAATCATTTTGATACAGCACGCAATGCTTTCTTTTGCTATATGACGGAAACCGGGAATTATTCCTGTGCTGACGGCAAAATGATCTTCCTCAGCGGCAGCCCCGAGCTGGAAAGAGTGGGTGGTATACCTACCGGCAGGCTCAGCGGGATATCCAACCACCTCGTTCCCCGCTACCTGCGCACCAACCAGTTGCCCAGCTACGAAACCAATTGTATAGAAGACTGGGAAACCAAGCTTGAGAAAATCGTGGATGAAACCATTGACCAGGATATGACGATGATCAGCGGTATCCCCCCATGGGTGCAGATGTATTTTGACCGGCTGATGGAAAGAAGCGGAGGTAAAAAGATAAAAGATATATTTCCCAATTTCAGTGTACTTGTG
PROTEIN sequence
Length: 223
MHTALEDQERILKELIKTGRKTAFGKEHGFNNINTYEEFKKAVPLRDYEAFKPYIELIKQGKHNILWKGLPIYFAKTSGTTSGTKYIPITKESVDNHFDTARNAFFCYMTETGNYSCADGKMIFLSGSPELERVGGIPTGRLSGISNHLVPRYLRTNQLPSYETNCIEDWETKLEKIVDETIDQDMTMISGIPPWVQMYFDRLMERSGGKKIKDIFPNFSVLV