ggKbase home page

SCNpilot_cont_300_bf_scaffold_846_27

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 24034..24891

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U641_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 285.0
  • Bit_score: 430
  • Evalue 1.10e-117
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KDP70786.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 285.0
  • Bit_score: 461
  • Evalue 1.10e-126
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 284.0
  • Bit_score: 445
  • Evalue 9.20e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGACGACGGAAGATTTCGAGACCCGCCTGCGCGAGCTCAGGCCACGGCTTCACCGCTACTGCGCGCGCATGACCGGCTCGACCGTGGATGGCGAGGACGTGCTGCAGGATACGCTGGTCAAGGCGTTGCGGGCGCATGCGGAGGGCTCGGTTGTCGAGAATCTCGAACCGTGGCTGCTGCGCATCGCCCACAACACGAGCCTGGATTTCCTGCGCCGGCGCGCCCGAAGCAACGTGGTGTCGCTCACCGAGGACCTGGAGGACGCGCCGATGCCGGAAGCGGACATCGTCGCGGTGGGCTTCCAGACATTTCTGCGGCTGCCCGAGCTTCAGCGCTGCGCCGTGATCCTCAAGGACGTGCTCGGCCACTCCATCGACGAGATCGCGGCGATCGCCGACTGCACGCCGGCCGCCGCCAAGTCAGCGCTTCAGCGCGGGCGGGTGGCGCTGCGGCAACTGGCCGGGCAGCCCGACGATACGCGGCTCCCGATCATGTCCGACGCCGCGCGTCGGAAGATGGCGGCCTATGTCCAGCTGTTCAAGAGCGGCGACTTCGACGCGATCCGCGCCATGCTCGCGGACGACGTGAAGCTCGACCTTGTGAACAGGCTCAAGCTCGAGGGCCGCTCCGACATCGGCCGCTACTTCACCCGCTATGCGGAGGAAACGAGATGGCGCTTTGCCCTGGGAGCGGTGGAGGGACGCCCGGCCATGCTGGTCTTCGACAGCAACGGCCCCATGGAAGAGCCCTCGCATTTCGTTCTGCTCGGCTGGCGCGAGGAGCGGATCGTCACGATCCGGGACTTCCTGTTTGCTCCCTACACGATCGAGGCTGTCGACTGGGTCCGCCTGGCCTGA
PROTEIN sequence
Length: 286
MTTEDFETRLRELRPRLHRYCARMTGSTVDGEDVLQDTLVKALRAHAEGSVVENLEPWLLRIAHNTSLDFLRRRARSNVVSLTEDLEDAPMPEADIVAVGFQTFLRLPELQRCAVILKDVLGHSIDEIAAIADCTPAAAKSALQRGRVALRQLAGQPDDTRLPIMSDAARRKMAAYVQLFKSGDFDAIRAMLADDVKLDLVNRLKLEGRSDIGRYFTRYAEETRWRFALGAVEGRPAMLVFDSNGPMEEPSHFVLLGWREERIVTIRDFLFAPYTIEAVDWVRLA*