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SCNpilot_cont_300_bf_scaffold_1768_14

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 14157..14513

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A0Q3_MAHA5 similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 106.0
  • Bit_score: 85
  • Evalue 3.60e-14
Ribose operon repressor {ECO:0000313|EMBL:EYR80195.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 110.0
  • Bit_score: 160
  • Evalue 1.20e-36
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 106.0
  • Bit_score: 85
  • Evalue 1.00e-14

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
TTGCCAGCTACCTCGGGAAGCCCTTCGCCAGGAGGCATCACGGTCGCTCCCGAACTCGTCCGCTGCGGCGAGTTCCAGCACAGCTTCGGCCACCAGGCGACGCTGGCGCTGCTGGCCGAAACCCGCTTTTCCGCCATCTGCTGCATGAGCGACATGCTGGCGCTCGGCGCCACAGTGGCCTTGCGCGAAAGCGGCCTCCGCGTGCCCGACGACTGCGCCGTCATGGGCTTCGACAACATCTATCTGGCGCCGCTGCTAGACAGGCCCCTGTCGACGATCGACCGGCGCATCTTCGAATCCGGCCGGATCGCCATCGACGCGCTGGTCGATTTCCTGGACGGTCCCGAACGGCAACGC
PROTEIN sequence
Length: 119
LPATSGSPSPGGITVAPELVRCGEFQHSFGHQATLALLAETRFSAICCMSDMLALGATVALRESGLRVPDDCAVMGFDNIYLAPLLDRPLSTIDRRIFESGRIAIDALVDFLDGPERQR