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SCNpilot_cont_300_bf_scaffold_1648_22

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(24299..25828)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma54 factor n=1 Tax=Rhizobium loti RepID=UPI00037A2494 similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 509.0
  • Bit_score: 884
  • Evalue 6.40e-254
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 509.0
  • Bit_score: 882
  • Evalue 2.60e-253
RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 509.0
  • Bit_score: 879
  • Evalue 5.80e-253
  • rbh

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1530
ATGGCACTGGCGGCAAAACTACAGCTACGACAGTCGCAGTCGCTGGTCATGACGCCGCAGCTGATGCAGTCGATCCGGCTGCTGCAGCTCACCCATGCCGAACTCGAGCAGTTCATCGACGACGAGATCGAGCGCAATCCGCTGCTGGAGCGGGCCGAGCCGCAGGACGACGCGGCGAGCGACCAGGCGCAGAAGGCCGAACCCGCGCCGGAGGCATCCGCGGCGGAAGGCGACTGGTTCGAGAGCGAGGCGGCTTGGAGCGCCGAGGCCATCTCCGACAAGCTCGATACGTCGCTGGAGAACCTGTTTCCCGACGATCCAGGCACCAGCGAACGGCTGGGACCGGATCTGAGCGCGCAGTGGAAATCGGCCTCCGGCCACGGCGCCGGCCCAGCAGCTGAAGGGTTCGATCCGGGCGACATGGCGGTGGCCGCAGTTACCCTGCGCGACCATGTCGGCGAGCAGATCGCCTTTGCCTTTACGGATCCCGCGGCCCGGCTGATCGCCGGCGAGCTTGCCGACGGCCTCGACGAGATGGGCTATCTGCGCGCCGATCCAGGCGAGATCGCCGCGCGCCTCGGCGCCGACGCCGGCCAGGTGGCCGAGGTGCTCCGGACCTGCCAGACATTCGAGCCTGCCGGCCTTTTCGCCCGTGACCTTGCCGAATGCCTGTCGCTCCAGCTCGCCGCGCGCGATCGGCTGGACCCCGCCATGAAGGCGCTGGTCGCCAATCTGGAACTTCTGGCGCGCCGCGACTTTCAGTCGCTCAAGCGCATCTGCGGCGTCGACCAGGAGGACCTGCTCGACATGCTGGCTGAAATCCGCGCGCTCGACCCCCGGCCGGGAGCGGCGTTCTCCGGCGGCGCCAGCGACGCGGTGGTGGCCGATGTCGAGGTGCGCGCGGCTAATGACGGCAGCTGGGTGGTGGAACTCAACGCCGAGACGCTGCCGCGCGTGCTGGTCGACCAGATCTACTACGCCCAGGTCTCGCCGCATGCGAAGAGCCAGGAGGAGAAGGATTTCCTGGCCGAATGCCTGCAGAGCGCCAATTGGCTGACGCGCAGCCTGGACCAGAGGGCCAAGACGATCCTCAAGGTGGCCTCCGAGATCGTGCGCCAGCAGGATGCGTTTCTCGTCCATGGCGTGCGCCACCTGAGGCCACTCAACCTGCGCACCGTGGCTGATGCCATCGGCATGCACGAATCGACCGTCAGCCGCGTCACCGCCAATAAATACATGCTGACGCCGCGCGGCGTGTTCGAGCTGCGCTATTTCTTCACGGCCTCGATCGCGGCGGCCGGCGGCGGCGACGCGCATTCGTCGGAAGCGGTGCGCGATCGCATCCGGCAGATGATCGACGAGGAGAAACCCGACGACGTTCTTTCCGATGACACGATCGTCGACATGCTGCGCGAGGGCGGCGTCGACATCGCCAGGCGCACCGTGGCCAAGTATCGGGAAGGCATGAACATTCCCTCCTCGGTCCAGAGGCGGCGCGAGAAAAGGGCGCTGGCAAGCGCCGGGCGTTGA
PROTEIN sequence
Length: 510
MALAAKLQLRQSQSLVMTPQLMQSIRLLQLTHAELEQFIDDEIERNPLLERAEPQDDAASDQAQKAEPAPEASAAEGDWFESEAAWSAEAISDKLDTSLENLFPDDPGTSERLGPDLSAQWKSASGHGAGPAAEGFDPGDMAVAAVTLRDHVGEQIAFAFTDPAARLIAGELADGLDEMGYLRADPGEIAARLGADAGQVAEVLRTCQTFEPAGLFARDLAECLSLQLAARDRLDPAMKALVANLELLARRDFQSLKRICGVDQEDLLDMLAEIRALDPRPGAAFSGGASDAVVADVEVRAANDGSWVVELNAETLPRVLVDQIYYAQVSPHAKSQEEKDFLAECLQSANWLTRSLDQRAKTILKVASEIVRQQDAFLVHGVRHLRPLNLRTVADAIGMHESTVSRVTANKYMLTPRGVFELRYFFTASIAAAGGGDAHSSEAVRDRIRQMIDEEKPDDVLSDDTIVDMLREGGVDIARRTVAKYREGMNIPSSVQRRREKRALASAGR*