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SCNpilot_cont_300_bf_scaffold_4026_1

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(2..1819)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor (Fragment) n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3U1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 606.0
  • Bit_score: 1126
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyll similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 607.0
  • Bit_score: 1130
  • Evalue 0.0
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 606.0
  • Bit_score: 1126
  • Evalue 0.0

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1818
ATGGCGACAAAGGAAAAGGAAGAGGTCGAAACCGAACGCGAAGGCGCAACCGATGGCCCTTTGCTCGACCTTTCCGATGATGCTGTCAAGAAGATGATCAAGGCCGCCAAGAAGCGCGGCTACGTGACCATGGACGAGCTGAACTCGGTGCTGCCTTCGGAGGAAGTGACCTCCGAGCAGATCGAGGACACGATGGCCATGCTGTCCGACATGGGCATCAATGTCGTCGAAGATGACGAGCAGGGCGAGGAGTCGGAGGCGAGCGACGCCAGCGCCGACGCCGATGAAGACGCCAACGAGCTCGCCGAGCAGACCGGCACGGCCGTCGCCACCACGACCACCAAGAAGGAACCCACCGATCGTACCGACGATCCGGTGCGCATGTACCTGCGCGAGATGGGCTCGGTCGAGCTCCTGTCGCGCGAGGGCGAAATCGCCATCGCCAAGCGCATCGAGGCCGGCCGCGAGACGATGATCGCGGGCCTGTGCGAAAGCCCGCTGACCTTCCAGGCCATCATCATCTGGCGCGACGAACTCAACGAATCCAAGATTCTGCTGCGCGAGATCATCGACCTCGAGGCGACCTATGCCGGCCCCGAGGCCAAGCAGGCGCCGGTGGTCGAGCGTGTCGAGGAAGCGCCCAAGCCCGAGGAAAAGCCTCGCCGCGGCGCCGCGCGCGACGAAGAGGACGACATCACCAATGTCGGTGGTGACACCCGCGGCATGGGCGAGGAAGAGGAAGACGACGAGGATGAGGCCAGCCTGTCGTTGGCGGCCATGGAAGCCGAGCTGCGCCCGCAGGTCATGGAGACGCTCGACGTCATCGCCGACACCTACAAGAAGCTGCGCAAGCTGCAGGACCAGCAGGTCGAGAACCGGCTCGCCGCCGCCGGCACGCTGTCGCCCAGCCAGGACCGCCGGCTGAAGGAACTGAAGGACCAGCTGATCAAGGCGGTGAAGTCGCTGTCGCTCAACACAGCGCGCATCGAGGCGCTGGTCGAGCAGCTCTACGACATCAACAAGCGCCTTGTGCAGAACGAGGGCAAGCTTTTGCGGCTCGCCGAGAGCTACGGCGTGCGCCGCGACGAGTTCCTCAGGGAGTATCAGGGCTCGGAACTCGACCCCAACTGGATGCGCTCGATCGCCAATCTGACGTCGCGCGGCTGGAAGGAATTCACCAAGAACGAGAAGGACGCCATCCGCGACCTGCGCGCCGAGATCCAGAACCTCGCCACCGAGACGGCGATCTCGATCCTGGAATTCCGCAAGATCGTCAATCAGGTGCAGAAGGGCGAGCGTGAAGCCGCGATCGCCAAGAAGGAAATGGTCGAGGCGAACCTGCGCCTCGTCATCTCGATCGCCAAGAAGTACACCAATCGCGGCCTGCAGTTCCTGGACCTGATCCAGGAAGGCAATATCGGCCTGATGAAGGCGGTCGACAAATTCGAGTACCGCCGCGGCTACAAGTTCTCGACCTACGCCACCTGGTGGATCCGGCAGGCCATCACCCGCTCGATCGCCGACCAGGCGCGCACCATCCGTATCCCGGTGCACATGATCGAGACGATCAACAAGATCGTGCGCACCTCGCGCCAGATGCTGCACGAGATCGGACGCGAGCCGACGCCGGAGGAACTGGCCGAAAAACTCGCCATGCCGCTGGAAAAGGTGCGCAAGGTGCTGAAGATCGCCAAGGAGCCGATCTCGCTCGAAACGCCGGTCGGCGACGAGGAGGATTCGCATCTCGGCGACTTCATCGAGGACAAGATGGCGATCCTGCCGATCGACGCGGCGATCCAGGCCAACCTGCGCGAGACC
PROTEIN sequence
Length: 606
MATKEKEEVETEREGATDGPLLDLSDDAVKKMIKAAKKRGYVTMDELNSVLPSEEVTSEQIEDTMAMLSDMGINVVEDDEQGEESEASDASADADEDANELAEQTGTAVATTTTKKEPTDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQAIIIWRDELNESKILLREIIDLEATYAGPEAKQAPVVERVEEAPKPEEKPRRGAARDEEDDITNVGGDTRGMGEEEEDDEDEASLSLAAMEAELRPQVMETLDVIADTYKKLRKLQDQQVENRLAAAGTLSPSQDRRLKELKDQLIKAVKSLSLNTARIEALVEQLYDINKRLVQNEGKLLRLAESYGVRRDEFLREYQGSELDPNWMRSIANLTSRGWKEFTKNEKDAIRDLRAEIQNLATETAISILEFRKIVNQVQKGEREAAIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKMAILPIDAAIQANLRET