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SCNpilot_cont_300_bf_scaffold_193_22

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(14507..15391)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, TIGR02957 family n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BNR2_MYCCN similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 292.0
  • Bit_score: 425
  • Evalue 4.70e-116
  • rbh
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KGI69643.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 291.0
  • Bit_score: 427
  • Evalue 1.70e-116
RNA polymerase sigma-70 factor, TIGR02957 family similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 292.0
  • Bit_score: 425
  • Evalue 1.30e-116

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Taxonomy

Mycobacterium rufum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGACCGGCCACGCCGAACGCTTCACGCCGCTGCGGCCGCTGCTGTTCACGATCGCCTACGAGATCCTCGGCTCGGCGACCGAGGCCGACGACGTGCTGCAGGACAGCTACCTGCGCTGGGCCGACGTCGACCTCGAGACCGTGCGCGAGCCGAAGTCCTACCTCGCCAAGGTCGTCACCCGGCAGGCGCTGAACGTGCTGCGCGCCAACGCCCGGCGGCGCGAGGACTACATCGGACCGTGGCTGCCCGAGCCCCTGCTGCTCGACGAGCACGACCCGGTGTCGGACGTCGTGCTCGCCGAGTCGGTGTCCACCGCGATGCTGGTGGTGCTGGAGACGTTGAGCCCCGACGAGCGGGCGGTGTTCGTCCTGCGCGAGGTGTTCGGGTTCGACTACGACGACATCGCCTCCGCCGTCGGCCGGCCCGCACCGACGGTGCGCCAGATCGCCCACCGGGCCCGCGAACACGTCCGCGCCCGGCGCCGGCGCTTCGAACCGGTCGACGAGGTGCTGTCGGCGCAGATCACCGGCGAGTTCCTCGCCGCCGCGGCCACCGGCGACGTCGAGAAGCTGATGGCGACCCTCGCCCCGGACGTGGCGTGGACCGCCGACAGCAACGGCAAGGCCAGCGCCGCCCGCCGCCCGGTGCTGGGTGCGGAGAAGGTCGCCCGGCTGATCGCGGGGATGATGCGGGGCGCCGGCACGCGCGGCCGTTTCGAGCCGGCCGTCTACAACAGCGCCCCGGCCCTGGTGCTGTACGACGACGACCACCTGGAGGGCGTCATCACCGTCGAGATCAACGACGGCCGGATCACCAACTTCTACGCCATGCGCAATCCCGACAAGCTGGCGGCGGTGTCGGTGCGGCGGACGATCGGGCGCTGA
PROTEIN sequence
Length: 295
MTGHAERFTPLRPLLFTIAYEILGSATEADDVLQDSYLRWADVDLETVREPKSYLAKVVTRQALNVLRANARRREDYIGPWLPEPLLLDEHDPVSDVVLAESVSTAMLVVLETLSPDERAVFVLREVFGFDYDDIASAVGRPAPTVRQIAHRAREHVRARRRRFEPVDEVLSAQITGEFLAAAATGDVEKLMATLAPDVAWTADSNGKASAARRPVLGAEKVARLIAGMMRGAGTRGRFEPAVYNSAPALVLYDDDHLEGVITVEINDGRITNFYAMRNPDKLAAVSVRRTIGR*